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Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data
Pituitary adenomas, monoclonal in origin, are the most common intracranial neoplasms. Altered gene expression as well as somatic mutations is detected frequently in pituitary adenomas. The purpose of this study was to detect differentially expressed genes (DEGs) and biological processes during tumor...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4302352/ https://www.ncbi.nlm.nih.gov/pubmed/25642247 http://dx.doi.org/10.1155/2015/164087 |
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author | Zhao, Peng Hu, Wei Wang, Hongyun Yu, Shengyuan Li, Chuzhong Bai, Jiwei Gui, Songbai Zhang, Yazhuo |
author_facet | Zhao, Peng Hu, Wei Wang, Hongyun Yu, Shengyuan Li, Chuzhong Bai, Jiwei Gui, Songbai Zhang, Yazhuo |
author_sort | Zhao, Peng |
collection | PubMed |
description | Pituitary adenomas, monoclonal in origin, are the most common intracranial neoplasms. Altered gene expression as well as somatic mutations is detected frequently in pituitary adenomas. The purpose of this study was to detect differentially expressed genes (DEGs) and biological processes during tumor formation of pituitary adenomas. We performed an integrated analysis of publicly available GEO datasets of pituitary adenomas to identify DEGs between pituitary adenomas and normal control (NC) tissues. Gene function analysis including Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, and protein-protein interaction (PPI) networks analysis was conducted to interpret the biological role of those DEGs. In this study we detected 3994 DEGs (2043 upregulated and 1951 downregulated) in pituitary adenoma through an integrated analysis of 5 different microarray datasets. Gene function analysis revealed that the functions of those DEGs were highly correlated with the development of pituitary adenoma. This integrated analysis of microarray data identified some genes and pathways associated with pituitary adenoma, which may help to understand the pathology underlying pituitary adenoma and contribute to the successful identification of therapeutic targets for pituitary adenoma. |
format | Online Article Text |
id | pubmed-4302352 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-43023522015-02-01 Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data Zhao, Peng Hu, Wei Wang, Hongyun Yu, Shengyuan Li, Chuzhong Bai, Jiwei Gui, Songbai Zhang, Yazhuo Int J Endocrinol Research Article Pituitary adenomas, monoclonal in origin, are the most common intracranial neoplasms. Altered gene expression as well as somatic mutations is detected frequently in pituitary adenomas. The purpose of this study was to detect differentially expressed genes (DEGs) and biological processes during tumor formation of pituitary adenomas. We performed an integrated analysis of publicly available GEO datasets of pituitary adenomas to identify DEGs between pituitary adenomas and normal control (NC) tissues. Gene function analysis including Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, and protein-protein interaction (PPI) networks analysis was conducted to interpret the biological role of those DEGs. In this study we detected 3994 DEGs (2043 upregulated and 1951 downregulated) in pituitary adenoma through an integrated analysis of 5 different microarray datasets. Gene function analysis revealed that the functions of those DEGs were highly correlated with the development of pituitary adenoma. This integrated analysis of microarray data identified some genes and pathways associated with pituitary adenoma, which may help to understand the pathology underlying pituitary adenoma and contribute to the successful identification of therapeutic targets for pituitary adenoma. Hindawi Publishing Corporation 2015 2015-01-06 /pmc/articles/PMC4302352/ /pubmed/25642247 http://dx.doi.org/10.1155/2015/164087 Text en Copyright © 2015 Peng Zhao et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhao, Peng Hu, Wei Wang, Hongyun Yu, Shengyuan Li, Chuzhong Bai, Jiwei Gui, Songbai Zhang, Yazhuo Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data |
title | Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data |
title_full | Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data |
title_fullStr | Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data |
title_full_unstemmed | Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data |
title_short | Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data |
title_sort | identification of differentially expressed genes in pituitary adenomas by integrating analysis of microarray data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4302352/ https://www.ncbi.nlm.nih.gov/pubmed/25642247 http://dx.doi.org/10.1155/2015/164087 |
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