Cargando…

Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma

Different types of genetic and epigenetic changes are associated with HNSCC. The molecular mechanisms of HNSCC carcinogenesis are still undergoing intensive investigation. WWOX gene expression is altered in many cancers and in a recent work reduced WWOX expression has been associated with miR-134 ex...

Descripción completa

Detalles Bibliográficos
Autores principales: Ekizoglu, Seda, Bulut, Pelin, Karaman, Emin, Kilic, Erkan, Buyru, Nur
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4303423/
https://www.ncbi.nlm.nih.gov/pubmed/25612104
http://dx.doi.org/10.1371/journal.pone.0115353
_version_ 1782353941157117952
author Ekizoglu, Seda
Bulut, Pelin
Karaman, Emin
Kilic, Erkan
Buyru, Nur
author_facet Ekizoglu, Seda
Bulut, Pelin
Karaman, Emin
Kilic, Erkan
Buyru, Nur
author_sort Ekizoglu, Seda
collection PubMed
description Different types of genetic and epigenetic changes are associated with HNSCC. The molecular mechanisms of HNSCC carcinogenesis are still undergoing intensive investigation. WWOX gene expression is altered in many cancers and in a recent work reduced WWOX expression has been associated with miR-134 expression in HNSCC. In this study we investigated the WWOX messenger RNA expression levels in association with the promoter methylation of the WWOX gene and miR-134 expression levels in 80 HNSCC tumor and non-cancerous tissue samples. Our results show that WWOX expression is down-regulated especially in advanced-stage tumor samples or in tumors with SCC. This down-regulation was associated with methylation of the WWOX promoter region but not with miR-134 expression. There was an inverse correlation between the expression level and promoter methylation. We also analyzed whole exons and exon/intron boundries of the WWOX gene by direct sequencing. In our study group we observed 10 different alterations in the coding sequences and 18 different alterations in the non-coding sequences of the WWOX gene in HNSCC tumor samples. These results indicate that the WWOX gene can be functionally inactivated by promoter methylation, epigenetically or by mutations affecting the sequences coding for the enzymatic domain of the gene, functionally. We conclude that inactivation of WWOX gene contributes to the progression of HNSCC.
format Online
Article
Text
id pubmed-4303423
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-43034232015-01-30 Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma Ekizoglu, Seda Bulut, Pelin Karaman, Emin Kilic, Erkan Buyru, Nur PLoS One Research Article Different types of genetic and epigenetic changes are associated with HNSCC. The molecular mechanisms of HNSCC carcinogenesis are still undergoing intensive investigation. WWOX gene expression is altered in many cancers and in a recent work reduced WWOX expression has been associated with miR-134 expression in HNSCC. In this study we investigated the WWOX messenger RNA expression levels in association with the promoter methylation of the WWOX gene and miR-134 expression levels in 80 HNSCC tumor and non-cancerous tissue samples. Our results show that WWOX expression is down-regulated especially in advanced-stage tumor samples or in tumors with SCC. This down-regulation was associated with methylation of the WWOX promoter region but not with miR-134 expression. There was an inverse correlation between the expression level and promoter methylation. We also analyzed whole exons and exon/intron boundries of the WWOX gene by direct sequencing. In our study group we observed 10 different alterations in the coding sequences and 18 different alterations in the non-coding sequences of the WWOX gene in HNSCC tumor samples. These results indicate that the WWOX gene can be functionally inactivated by promoter methylation, epigenetically or by mutations affecting the sequences coding for the enzymatic domain of the gene, functionally. We conclude that inactivation of WWOX gene contributes to the progression of HNSCC. Public Library of Science 2015-01-22 /pmc/articles/PMC4303423/ /pubmed/25612104 http://dx.doi.org/10.1371/journal.pone.0115353 Text en © 2015 Ekizoglu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ekizoglu, Seda
Bulut, Pelin
Karaman, Emin
Kilic, Erkan
Buyru, Nur
Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma
title Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma
title_full Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma
title_fullStr Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma
title_full_unstemmed Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma
title_short Epigenetic and Genetic Alterations Affect the WWOX Gene in Head and Neck Squamous Cell Carcinoma
title_sort epigenetic and genetic alterations affect the wwox gene in head and neck squamous cell carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4303423/
https://www.ncbi.nlm.nih.gov/pubmed/25612104
http://dx.doi.org/10.1371/journal.pone.0115353
work_keys_str_mv AT ekizogluseda epigeneticandgeneticalterationsaffectthewwoxgeneinheadandnecksquamouscellcarcinoma
AT bulutpelin epigeneticandgeneticalterationsaffectthewwoxgeneinheadandnecksquamouscellcarcinoma
AT karamanemin epigeneticandgeneticalterationsaffectthewwoxgeneinheadandnecksquamouscellcarcinoma
AT kilicerkan epigeneticandgeneticalterationsaffectthewwoxgeneinheadandnecksquamouscellcarcinoma
AT buyrunur epigeneticandgeneticalterationsaffectthewwoxgeneinheadandnecksquamouscellcarcinoma