Cargando…

DataUp: A tool to help researchers describe and share tabular data

Scientific datasets have immeasurable value, but they lose their value over time without proper documentation, long-term storage, and easy discovery and access. Across disciplines as diverse as astronomy, demography, archeology, and ecology, large numbers of small heterogeneous datasets (i.e., the l...

Descripción completa

Detalles Bibliográficos
Autores principales: Strasser, Carly, Kunze, John, Abrams, Stephen, Cruse, Patricia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304223/
https://www.ncbi.nlm.nih.gov/pubmed/25653834
http://dx.doi.org/10.12688/f1000research.3-6.v2
_version_ 1782354059139743744
author Strasser, Carly
Kunze, John
Abrams, Stephen
Cruse, Patricia
author_facet Strasser, Carly
Kunze, John
Abrams, Stephen
Cruse, Patricia
author_sort Strasser, Carly
collection PubMed
description Scientific datasets have immeasurable value, but they lose their value over time without proper documentation, long-term storage, and easy discovery and access. Across disciplines as diverse as astronomy, demography, archeology, and ecology, large numbers of small heterogeneous datasets (i.e., the long tail of data) are especially at risk unless they are properly documented, saved, and shared. One unifying factor for many of these at-risk datasets is that they reside in spreadsheets. In response to this need, the California Digital Library (CDL) partnered with Microsoft Research Connections and the Gordon and Betty Moore Foundation to create the DataUp data management tool for Microsoft Excel. Many researchers creating these small, heterogeneous datasets use Excel at some point in their data collection and analysis workflow, so we were interested in developing a data management tool that fits easily into those work flows and minimizes the learning curve for researchers. The DataUp project began in August 2011. We first formally assessed the needs of researchers by conducting surveys and interviews of our target research groups: earth, environmental, and ecological scientists. We found that, on average, researchers had very poor data management practices, were not aware of data centers or metadata standards, and did not understand the benefits of data management or sharing. Based on our survey results, we composed a list of desirable components and requirements and solicited feedback from the community to prioritize potential features of the DataUp tool. These requirements were then relayed to the software developers, and DataUp was successfully launched in October 2012.
format Online
Article
Text
id pubmed-4304223
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher F1000Research
record_format MEDLINE/PubMed
spelling pubmed-43042232015-02-03 DataUp: A tool to help researchers describe and share tabular data Strasser, Carly Kunze, John Abrams, Stephen Cruse, Patricia F1000Res Software Tool Article Scientific datasets have immeasurable value, but they lose their value over time without proper documentation, long-term storage, and easy discovery and access. Across disciplines as diverse as astronomy, demography, archeology, and ecology, large numbers of small heterogeneous datasets (i.e., the long tail of data) are especially at risk unless they are properly documented, saved, and shared. One unifying factor for many of these at-risk datasets is that they reside in spreadsheets. In response to this need, the California Digital Library (CDL) partnered with Microsoft Research Connections and the Gordon and Betty Moore Foundation to create the DataUp data management tool for Microsoft Excel. Many researchers creating these small, heterogeneous datasets use Excel at some point in their data collection and analysis workflow, so we were interested in developing a data management tool that fits easily into those work flows and minimizes the learning curve for researchers. The DataUp project began in August 2011. We first formally assessed the needs of researchers by conducting surveys and interviews of our target research groups: earth, environmental, and ecological scientists. We found that, on average, researchers had very poor data management practices, were not aware of data centers or metadata standards, and did not understand the benefits of data management or sharing. Based on our survey results, we composed a list of desirable components and requirements and solicited feedback from the community to prioritize potential features of the DataUp tool. These requirements were then relayed to the software developers, and DataUp was successfully launched in October 2012. F1000Research 2014-09-12 /pmc/articles/PMC4304223/ /pubmed/25653834 http://dx.doi.org/10.12688/f1000research.3-6.v2 Text en Copyright: © 2014 Strasser C et al. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/publicdomain/zero/1.0/ Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication).
spellingShingle Software Tool Article
Strasser, Carly
Kunze, John
Abrams, Stephen
Cruse, Patricia
DataUp: A tool to help researchers describe and share tabular data
title DataUp: A tool to help researchers describe and share tabular data
title_full DataUp: A tool to help researchers describe and share tabular data
title_fullStr DataUp: A tool to help researchers describe and share tabular data
title_full_unstemmed DataUp: A tool to help researchers describe and share tabular data
title_short DataUp: A tool to help researchers describe and share tabular data
title_sort dataup: a tool to help researchers describe and share tabular data
topic Software Tool Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304223/
https://www.ncbi.nlm.nih.gov/pubmed/25653834
http://dx.doi.org/10.12688/f1000research.3-6.v2
work_keys_str_mv AT strassercarly dataupatooltohelpresearchersdescribeandsharetabulardata
AT kunzejohn dataupatooltohelpresearchersdescribeandsharetabulardata
AT abramsstephen dataupatooltohelpresearchersdescribeandsharetabulardata
AT crusepatricia dataupatooltohelpresearchersdescribeandsharetabulardata