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A random forest model based classification scheme for neonatal amplitude-integrated EEG

BACKGROUND: Modern medical advances have greatly increased the survival rate of infants, while they remain in the higher risk group for neurological problems later in life. For the infants with encephalopathy or seizures, identification of the extent of brain injury is clinically challenging. Contin...

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Autores principales: Chen, Weiting, Wang, Yu, Cao, Guitao, Chen, Guoqiang, Gu, Qiufang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304248/
https://www.ncbi.nlm.nih.gov/pubmed/25560269
http://dx.doi.org/10.1186/1475-925X-13-S2-S4
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author Chen, Weiting
Wang, Yu
Cao, Guitao
Chen, Guoqiang
Gu, Qiufang
author_facet Chen, Weiting
Wang, Yu
Cao, Guitao
Chen, Guoqiang
Gu, Qiufang
author_sort Chen, Weiting
collection PubMed
description BACKGROUND: Modern medical advances have greatly increased the survival rate of infants, while they remain in the higher risk group for neurological problems later in life. For the infants with encephalopathy or seizures, identification of the extent of brain injury is clinically challenging. Continuous amplitude-integrated electroencephalography (aEEG) monitoring offers a possibility to directly monitor the brain functional state of the newborns over hours, and has seen an increasing application in neonatal intensive care units (NICUs). METHODS: This paper presents a novel combined feature set of aEEG and applies random forest (RF) method to classify aEEG tracings. To that end, a series of experiments were conducted on 282 aEEG tracing cases (209 normal and 73 abnormal ones). Basic features, statistic features and segmentation features were extracted from both the tracing as a whole and the segmented recordings, and then form a combined feature set. All the features were sent to a classifier afterwards. The significance of feature, the data segmentation, the optimization of RF parameters, and the problem of imbalanced datasets were examined through experiments. Experiments were also done to evaluate the performance of RF on aEEG signal classifying, compared with several other widely used classifiers including SVM-Linear, SVM-RBF, ANN, Decision Tree (DT), Logistic Regression(LR), ML, and LDA. RESULTS: The combined feature set can better characterize aEEG signals, compared with basic features, statistic features and segmentation features respectively. With the combined feature set, the proposed RF-based aEEG classification system achieved a correct rate of 92.52% and a high F1-score of 95.26%. Among all of the seven classifiers examined in our work, the RF method got the highest correct rate, sensitivity, specificity, and F(1)-score, which means that RF outperforms all of the other classifiers considered here. The results show that the proposed RF-based aEEG classification system with the combined feature set is efficient and helpful to better detect the brain disorders in newborns.
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spelling pubmed-43042482015-02-12 A random forest model based classification scheme for neonatal amplitude-integrated EEG Chen, Weiting Wang, Yu Cao, Guitao Chen, Guoqiang Gu, Qiufang Biomed Eng Online Research BACKGROUND: Modern medical advances have greatly increased the survival rate of infants, while they remain in the higher risk group for neurological problems later in life. For the infants with encephalopathy or seizures, identification of the extent of brain injury is clinically challenging. Continuous amplitude-integrated electroencephalography (aEEG) monitoring offers a possibility to directly monitor the brain functional state of the newborns over hours, and has seen an increasing application in neonatal intensive care units (NICUs). METHODS: This paper presents a novel combined feature set of aEEG and applies random forest (RF) method to classify aEEG tracings. To that end, a series of experiments were conducted on 282 aEEG tracing cases (209 normal and 73 abnormal ones). Basic features, statistic features and segmentation features were extracted from both the tracing as a whole and the segmented recordings, and then form a combined feature set. All the features were sent to a classifier afterwards. The significance of feature, the data segmentation, the optimization of RF parameters, and the problem of imbalanced datasets were examined through experiments. Experiments were also done to evaluate the performance of RF on aEEG signal classifying, compared with several other widely used classifiers including SVM-Linear, SVM-RBF, ANN, Decision Tree (DT), Logistic Regression(LR), ML, and LDA. RESULTS: The combined feature set can better characterize aEEG signals, compared with basic features, statistic features and segmentation features respectively. With the combined feature set, the proposed RF-based aEEG classification system achieved a correct rate of 92.52% and a high F1-score of 95.26%. Among all of the seven classifiers examined in our work, the RF method got the highest correct rate, sensitivity, specificity, and F(1)-score, which means that RF outperforms all of the other classifiers considered here. The results show that the proposed RF-based aEEG classification system with the combined feature set is efficient and helpful to better detect the brain disorders in newborns. BioMed Central 2014-12-11 /pmc/articles/PMC4304248/ /pubmed/25560269 http://dx.doi.org/10.1186/1475-925X-13-S2-S4 Text en Copyright © 2014 Chen et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Chen, Weiting
Wang, Yu
Cao, Guitao
Chen, Guoqiang
Gu, Qiufang
A random forest model based classification scheme for neonatal amplitude-integrated EEG
title A random forest model based classification scheme for neonatal amplitude-integrated EEG
title_full A random forest model based classification scheme for neonatal amplitude-integrated EEG
title_fullStr A random forest model based classification scheme for neonatal amplitude-integrated EEG
title_full_unstemmed A random forest model based classification scheme for neonatal amplitude-integrated EEG
title_short A random forest model based classification scheme for neonatal amplitude-integrated EEG
title_sort random forest model based classification scheme for neonatal amplitude-integrated eeg
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304248/
https://www.ncbi.nlm.nih.gov/pubmed/25560269
http://dx.doi.org/10.1186/1475-925X-13-S2-S4
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