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A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization

[Image: see text] Engineered biological circuits are often disturbed by a variety of environmental factors. In batch culture, where the majority of synthetic circuit characterization occurs, environmental conditions vary as the culture matures. Turbidostats are powerful characterization tools that p...

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Autores principales: Takahashi, Chris N., Miller, Aaron W., Ekness, Felix, Dunham, Maitreya J., Klavins, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2014
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304434/
https://www.ncbi.nlm.nih.gov/pubmed/25036317
http://dx.doi.org/10.1021/sb500165g
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author Takahashi, Chris N.
Miller, Aaron W.
Ekness, Felix
Dunham, Maitreya J.
Klavins, Eric
author_facet Takahashi, Chris N.
Miller, Aaron W.
Ekness, Felix
Dunham, Maitreya J.
Klavins, Eric
author_sort Takahashi, Chris N.
collection PubMed
description [Image: see text] Engineered biological circuits are often disturbed by a variety of environmental factors. In batch culture, where the majority of synthetic circuit characterization occurs, environmental conditions vary as the culture matures. Turbidostats are powerful characterization tools that provide static culture environments; however, they are often expensive, especially when purchased in custom configurations, and are difficult to design and construct in a lab. Here, we present a low cost, open source multiplexed turbidostat that can be manufactured and used with minimal experience in electrical or software engineering. We demonstrate the utility of this system to profile synthetic circuit behavior in S. cerevisiae. We also demonstrate the flexibility of the design by showing that a fluorometer can be easily integrated.
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spelling pubmed-43044342015-07-18 A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization Takahashi, Chris N. Miller, Aaron W. Ekness, Felix Dunham, Maitreya J. Klavins, Eric ACS Synth Biol [Image: see text] Engineered biological circuits are often disturbed by a variety of environmental factors. In batch culture, where the majority of synthetic circuit characterization occurs, environmental conditions vary as the culture matures. Turbidostats are powerful characterization tools that provide static culture environments; however, they are often expensive, especially when purchased in custom configurations, and are difficult to design and construct in a lab. Here, we present a low cost, open source multiplexed turbidostat that can be manufactured and used with minimal experience in electrical or software engineering. We demonstrate the utility of this system to profile synthetic circuit behavior in S. cerevisiae. We also demonstrate the flexibility of the design by showing that a fluorometer can be easily integrated. American Chemical Society 2014-07-18 2015-01-16 /pmc/articles/PMC4304434/ /pubmed/25036317 http://dx.doi.org/10.1021/sb500165g Text en Copyright © 2014 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Takahashi, Chris N.
Miller, Aaron W.
Ekness, Felix
Dunham, Maitreya J.
Klavins, Eric
A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization
title A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization
title_full A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization
title_fullStr A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization
title_full_unstemmed A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization
title_short A Low Cost, Customizable Turbidostat for Use in Synthetic Circuit Characterization
title_sort low cost, customizable turbidostat for use in synthetic circuit characterization
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304434/
https://www.ncbi.nlm.nih.gov/pubmed/25036317
http://dx.doi.org/10.1021/sb500165g
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