Cargando…
Projected Hybrid Orbitals: A General QM/MM Method
[Image: see text] A projected hybrid orbital (PHO) method was described to model the covalent boundary in a hybrid quantum mechanical and molecular mechanical (QM/MM) system. The PHO approach can be used in ab initio wave function theory and in density functional theory with any basis set without in...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4306490/ https://www.ncbi.nlm.nih.gov/pubmed/25317748 http://dx.doi.org/10.1021/jp507983u |
_version_ | 1782354331008237568 |
---|---|
author | Wang, Yingjie Gao, Jiali |
author_facet | Wang, Yingjie Gao, Jiali |
author_sort | Wang, Yingjie |
collection | PubMed |
description | [Image: see text] A projected hybrid orbital (PHO) method was described to model the covalent boundary in a hybrid quantum mechanical and molecular mechanical (QM/MM) system. The PHO approach can be used in ab initio wave function theory and in density functional theory with any basis set without introducing system-dependent parameters. In this method, a secondary basis set on the boundary atom is introduced to formulate a set of hybrid atomic orbtials. The primary basis set on the boundary atom used for the QM subsystem is projected onto the secondary basis to yield a representation that provides a good approximation to the electron-withdrawing power of the primary basis set to balance electronic interactions between QM and MM subsystems. The PHO method has been tested on a range of molecules and properties. Comparison with results obtained from QM calculations on the entire system shows that the present PHO method is a robust and balanced QM/MM scheme that preserves the structural and electronic properties of the QM region. |
format | Online Article Text |
id | pubmed-4306490 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-43064902015-10-15 Projected Hybrid Orbitals: A General QM/MM Method Wang, Yingjie Gao, Jiali J Phys Chem B [Image: see text] A projected hybrid orbital (PHO) method was described to model the covalent boundary in a hybrid quantum mechanical and molecular mechanical (QM/MM) system. The PHO approach can be used in ab initio wave function theory and in density functional theory with any basis set without introducing system-dependent parameters. In this method, a secondary basis set on the boundary atom is introduced to formulate a set of hybrid atomic orbtials. The primary basis set on the boundary atom used for the QM subsystem is projected onto the secondary basis to yield a representation that provides a good approximation to the electron-withdrawing power of the primary basis set to balance electronic interactions between QM and MM subsystems. The PHO method has been tested on a range of molecules and properties. Comparison with results obtained from QM calculations on the entire system shows that the present PHO method is a robust and balanced QM/MM scheme that preserves the structural and electronic properties of the QM region. American Chemical Society 2014-10-15 2015-01-22 /pmc/articles/PMC4306490/ /pubmed/25317748 http://dx.doi.org/10.1021/jp507983u Text en Copyright © 2014 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Wang, Yingjie Gao, Jiali Projected Hybrid Orbitals: A General QM/MM Method |
title | Projected
Hybrid Orbitals: A General QM/MM Method |
title_full | Projected
Hybrid Orbitals: A General QM/MM Method |
title_fullStr | Projected
Hybrid Orbitals: A General QM/MM Method |
title_full_unstemmed | Projected
Hybrid Orbitals: A General QM/MM Method |
title_short | Projected
Hybrid Orbitals: A General QM/MM Method |
title_sort | projected
hybrid orbitals: a general qm/mm method |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4306490/ https://www.ncbi.nlm.nih.gov/pubmed/25317748 http://dx.doi.org/10.1021/jp507983u |
work_keys_str_mv | AT wangyingjie projectedhybridorbitalsageneralqmmmmethod AT gaojiali projectedhybridorbitalsageneralqmmmmethod |