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Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies
Ever since the case of the missing heritability was highlighted some years ago, scientists have been investigating various possible explanations for the issue. However, none of these explanations include non-chromosomal genetic information. Here we describe explicitly how chromosomal and non-chromos...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4308103/ https://www.ncbi.nlm.nih.gov/pubmed/25626013 http://dx.doi.org/10.1371/journal.pone.0117014 |
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author | Rawi, Reda El Anbari, Mohamed Bensmail, Halima |
author_facet | Rawi, Reda El Anbari, Mohamed Bensmail, Halima |
author_sort | Rawi, Reda |
collection | PubMed |
description | Ever since the case of the missing heritability was highlighted some years ago, scientists have been investigating various possible explanations for the issue. However, none of these explanations include non-chromosomal genetic information. Here we describe explicitly how chromosomal and non-chromosomal modifiers collectively influence the heritability of a trait, in this case, the growth rate of yeast. Our results show that the non-chromosomal contribution can be large, adding another dimension to the estimation of heritability. We also discovered, combining the strength of LASSO with model selection, that the interaction of chromosomal and non-chromosomal information is essential in describing phenotypes. |
format | Online Article Text |
id | pubmed-4308103 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43081032015-02-06 Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies Rawi, Reda El Anbari, Mohamed Bensmail, Halima PLoS One Research Article Ever since the case of the missing heritability was highlighted some years ago, scientists have been investigating various possible explanations for the issue. However, none of these explanations include non-chromosomal genetic information. Here we describe explicitly how chromosomal and non-chromosomal modifiers collectively influence the heritability of a trait, in this case, the growth rate of yeast. Our results show that the non-chromosomal contribution can be large, adding another dimension to the estimation of heritability. We also discovered, combining the strength of LASSO with model selection, that the interaction of chromosomal and non-chromosomal information is essential in describing phenotypes. Public Library of Science 2015-01-27 /pmc/articles/PMC4308103/ /pubmed/25626013 http://dx.doi.org/10.1371/journal.pone.0117014 Text en © 2015 Rawi et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Rawi, Reda El Anbari, Mohamed Bensmail, Halima Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies |
title | Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies |
title_full | Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies |
title_fullStr | Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies |
title_full_unstemmed | Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies |
title_short | Model Selection Emphasises the Importance of Non-Chromosomal Information in Genetic Studies |
title_sort | model selection emphasises the importance of non-chromosomal information in genetic studies |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4308103/ https://www.ncbi.nlm.nih.gov/pubmed/25626013 http://dx.doi.org/10.1371/journal.pone.0117014 |
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