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A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus

Non-coding RNAs (ncRNAs) play major roles in proper chromatin organization and function. Senescence, a strong anti-proliferative process and a major anticancer barrier, is associated with dramatic chromatin reorganization in heterochromatin foci. Here we analyze strand-specific transcriptome changes...

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Autores principales: Lazorthes, Sandra, Vallot, Céline, Briois, Sébastien, Aguirrebengoa, Marion, Thuret, Jean-Yves, Laurent, Georges St., Rougeulle, Claire, Kapranov, Philipp, Mann, Carl, Trouche, Didier, Nicolas, Estelle
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Pub. Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4309439/
https://www.ncbi.nlm.nih.gov/pubmed/25601475
http://dx.doi.org/10.1038/ncomms6971
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author Lazorthes, Sandra
Vallot, Céline
Briois, Sébastien
Aguirrebengoa, Marion
Thuret, Jean-Yves
Laurent, Georges St.
Rougeulle, Claire
Kapranov, Philipp
Mann, Carl
Trouche, Didier
Nicolas, Estelle
author_facet Lazorthes, Sandra
Vallot, Céline
Briois, Sébastien
Aguirrebengoa, Marion
Thuret, Jean-Yves
Laurent, Georges St.
Rougeulle, Claire
Kapranov, Philipp
Mann, Carl
Trouche, Didier
Nicolas, Estelle
author_sort Lazorthes, Sandra
collection PubMed
description Non-coding RNAs (ncRNAs) play major roles in proper chromatin organization and function. Senescence, a strong anti-proliferative process and a major anticancer barrier, is associated with dramatic chromatin reorganization in heterochromatin foci. Here we analyze strand-specific transcriptome changes during oncogene-induced human senescence. Strikingly, while differentially expressed RNAs are mostly repressed during senescence, ncRNAs belonging to the recently described vlincRNA (very long intergenic ncRNA) class are mainly activated. We show that VAD, a novel antisense vlincRNA strongly induced during senescence, is required for the maintenance of senescence features. VAD modulates chromatin structure in cis and activates gene expression in trans at the INK4 locus, which encodes cell cycle inhibitors important for senescence-associated cell proliferation arrest. Importantly, VAD inhibits the incorporation of the repressive histone variant H2A.Z at INK4 gene promoters in senescent cells. Our data underline the importance of vlincRNAs as sensors of cellular environment changes and as mediators of the correct transcriptional response.
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spelling pubmed-43094392015-02-09 A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus Lazorthes, Sandra Vallot, Céline Briois, Sébastien Aguirrebengoa, Marion Thuret, Jean-Yves Laurent, Georges St. Rougeulle, Claire Kapranov, Philipp Mann, Carl Trouche, Didier Nicolas, Estelle Nat Commun Article Non-coding RNAs (ncRNAs) play major roles in proper chromatin organization and function. Senescence, a strong anti-proliferative process and a major anticancer barrier, is associated with dramatic chromatin reorganization in heterochromatin foci. Here we analyze strand-specific transcriptome changes during oncogene-induced human senescence. Strikingly, while differentially expressed RNAs are mostly repressed during senescence, ncRNAs belonging to the recently described vlincRNA (very long intergenic ncRNA) class are mainly activated. We show that VAD, a novel antisense vlincRNA strongly induced during senescence, is required for the maintenance of senescence features. VAD modulates chromatin structure in cis and activates gene expression in trans at the INK4 locus, which encodes cell cycle inhibitors important for senescence-associated cell proliferation arrest. Importantly, VAD inhibits the incorporation of the repressive histone variant H2A.Z at INK4 gene promoters in senescent cells. Our data underline the importance of vlincRNAs as sensors of cellular environment changes and as mediators of the correct transcriptional response. Nature Pub. Group 2015-01-20 /pmc/articles/PMC4309439/ /pubmed/25601475 http://dx.doi.org/10.1038/ncomms6971 Text en Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Lazorthes, Sandra
Vallot, Céline
Briois, Sébastien
Aguirrebengoa, Marion
Thuret, Jean-Yves
Laurent, Georges St.
Rougeulle, Claire
Kapranov, Philipp
Mann, Carl
Trouche, Didier
Nicolas, Estelle
A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus
title A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus
title_full A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus
title_fullStr A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus
title_full_unstemmed A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus
title_short A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus
title_sort vlincrna participates in senescence maintenance by relieving h2az-mediated repression at the ink4 locus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4309439/
https://www.ncbi.nlm.nih.gov/pubmed/25601475
http://dx.doi.org/10.1038/ncomms6971
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