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Gaussian mixture models and semantic gating improve reconstructions from human brain activity

Better acquisition protocols and analysis techniques are making it possible to use fMRI to obtain highly detailed visualizations of brain processes. In particular we focus on the reconstruction of natural images from BOLD responses in visual cortex. We expand our linear Gaussian framework for percep...

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Autores principales: Schoenmakers, Sanne, Güçlü, Umut, van Gerven, Marcel, Heskes, Tom
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4311641/
https://www.ncbi.nlm.nih.gov/pubmed/25688202
http://dx.doi.org/10.3389/fncom.2014.00173
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author Schoenmakers, Sanne
Güçlü, Umut
van Gerven, Marcel
Heskes, Tom
author_facet Schoenmakers, Sanne
Güçlü, Umut
van Gerven, Marcel
Heskes, Tom
author_sort Schoenmakers, Sanne
collection PubMed
description Better acquisition protocols and analysis techniques are making it possible to use fMRI to obtain highly detailed visualizations of brain processes. In particular we focus on the reconstruction of natural images from BOLD responses in visual cortex. We expand our linear Gaussian framework for percept decoding with Gaussian mixture models to better represent the prior distribution of natural images. Reconstruction of such images then boils down to probabilistic inference in a hybrid Bayesian network. In our set-up, different mixture components correspond to different character categories. Our framework can automatically infer higher-order semantic categories from lower-level brain areas. Furthermore, the framework can gate semantic information from higher-order brain areas to enforce the correct category during reconstruction. When categorical information is not available, we show that automatically learned clusters in the data give a similar improvement in reconstruction. The hybrid Bayesian network leads to highly accurate reconstructions in both supervised and unsupervised settings.
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spelling pubmed-43116412015-02-16 Gaussian mixture models and semantic gating improve reconstructions from human brain activity Schoenmakers, Sanne Güçlü, Umut van Gerven, Marcel Heskes, Tom Front Comput Neurosci Neuroscience Better acquisition protocols and analysis techniques are making it possible to use fMRI to obtain highly detailed visualizations of brain processes. In particular we focus on the reconstruction of natural images from BOLD responses in visual cortex. We expand our linear Gaussian framework for percept decoding with Gaussian mixture models to better represent the prior distribution of natural images. Reconstruction of such images then boils down to probabilistic inference in a hybrid Bayesian network. In our set-up, different mixture components correspond to different character categories. Our framework can automatically infer higher-order semantic categories from lower-level brain areas. Furthermore, the framework can gate semantic information from higher-order brain areas to enforce the correct category during reconstruction. When categorical information is not available, we show that automatically learned clusters in the data give a similar improvement in reconstruction. The hybrid Bayesian network leads to highly accurate reconstructions in both supervised and unsupervised settings. Frontiers Media S.A. 2015-01-30 /pmc/articles/PMC4311641/ /pubmed/25688202 http://dx.doi.org/10.3389/fncom.2014.00173 Text en Copyright © 2015 Schoenmakers, Güçlü, van Gerven and Heskes. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Schoenmakers, Sanne
Güçlü, Umut
van Gerven, Marcel
Heskes, Tom
Gaussian mixture models and semantic gating improve reconstructions from human brain activity
title Gaussian mixture models and semantic gating improve reconstructions from human brain activity
title_full Gaussian mixture models and semantic gating improve reconstructions from human brain activity
title_fullStr Gaussian mixture models and semantic gating improve reconstructions from human brain activity
title_full_unstemmed Gaussian mixture models and semantic gating improve reconstructions from human brain activity
title_short Gaussian mixture models and semantic gating improve reconstructions from human brain activity
title_sort gaussian mixture models and semantic gating improve reconstructions from human brain activity
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4311641/
https://www.ncbi.nlm.nih.gov/pubmed/25688202
http://dx.doi.org/10.3389/fncom.2014.00173
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