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Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases

With the advent of age of big data and advances in high throughput technology accessing data has become one of the most important step in the entire knowledge discovery process. Most users are not able to decipher the query result that is obtained when non specific keywords or a combination of keywo...

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Autores principales: Ganguli, Sayak, Gupta, Manoj Kumar, Basu, Protip, Banik, Rahul, Singh, Pankaj Kumar, Vishal, Vineet, Bera, Abhisek Ranjan, Chakraborty, Hirak Jyoti, Das, Sasti Gopal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312370/
https://www.ncbi.nlm.nih.gov/pubmed/25670880
http://dx.doi.org/10.6026/97320630010764
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author Ganguli, Sayak
Gupta, Manoj Kumar
Basu, Protip
Banik, Rahul
Singh, Pankaj Kumar
Vishal, Vineet
Bera, Abhisek Ranjan
Chakraborty, Hirak Jyoti
Das, Sasti Gopal
author_facet Ganguli, Sayak
Gupta, Manoj Kumar
Basu, Protip
Banik, Rahul
Singh, Pankaj Kumar
Vishal, Vineet
Bera, Abhisek Ranjan
Chakraborty, Hirak Jyoti
Das, Sasti Gopal
author_sort Ganguli, Sayak
collection PubMed
description With the advent of age of big data and advances in high throughput technology accessing data has become one of the most important step in the entire knowledge discovery process. Most users are not able to decipher the query result that is obtained when non specific keywords or a combination of keywords are used. Intelligent access to sequence and structure databases (IASSD) is a desktop application for windows operating system. It is written in Java and utilizes the web service description language (wsdl) files and Jar files of E-utilities of various databases such as National Centre for Biotechnology Information (NCBI) and Protein Data Bank (PDB). Apart from that IASSD allows the user to view protein structure using a JMOL application which supports conditional editing. AVAILABILITY: The Jar file is freely available through e-mail from the corresponding author.
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spelling pubmed-43123702015-02-10 Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases Ganguli, Sayak Gupta, Manoj Kumar Basu, Protip Banik, Rahul Singh, Pankaj Kumar Vishal, Vineet Bera, Abhisek Ranjan Chakraborty, Hirak Jyoti Das, Sasti Gopal Bioinformation Database With the advent of age of big data and advances in high throughput technology accessing data has become one of the most important step in the entire knowledge discovery process. Most users are not able to decipher the query result that is obtained when non specific keywords or a combination of keywords are used. Intelligent access to sequence and structure databases (IASSD) is a desktop application for windows operating system. It is written in Java and utilizes the web service description language (wsdl) files and Jar files of E-utilities of various databases such as National Centre for Biotechnology Information (NCBI) and Protein Data Bank (PDB). Apart from that IASSD allows the user to view protein structure using a JMOL application which supports conditional editing. AVAILABILITY: The Jar file is freely available through e-mail from the corresponding author. Biomedical Informatics 2014-12-31 /pmc/articles/PMC4312370/ /pubmed/25670880 http://dx.doi.org/10.6026/97320630010764 Text en © 2014 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Database
Ganguli, Sayak
Gupta, Manoj Kumar
Basu, Protip
Banik, Rahul
Singh, Pankaj Kumar
Vishal, Vineet
Bera, Abhisek Ranjan
Chakraborty, Hirak Jyoti
Das, Sasti Gopal
Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases
title Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases
title_full Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases
title_fullStr Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases
title_full_unstemmed Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases
title_short Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases
title_sort intelligent access to sequence and structure databases (iassd) − an interface for accessing information from major web databases
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312370/
https://www.ncbi.nlm.nih.gov/pubmed/25670880
http://dx.doi.org/10.6026/97320630010764
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