Cargando…
Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases
With the advent of age of big data and advances in high throughput technology accessing data has become one of the most important step in the entire knowledge discovery process. Most users are not able to decipher the query result that is obtained when non specific keywords or a combination of keywo...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312370/ https://www.ncbi.nlm.nih.gov/pubmed/25670880 http://dx.doi.org/10.6026/97320630010764 |
_version_ | 1782355111177093120 |
---|---|
author | Ganguli, Sayak Gupta, Manoj Kumar Basu, Protip Banik, Rahul Singh, Pankaj Kumar Vishal, Vineet Bera, Abhisek Ranjan Chakraborty, Hirak Jyoti Das, Sasti Gopal |
author_facet | Ganguli, Sayak Gupta, Manoj Kumar Basu, Protip Banik, Rahul Singh, Pankaj Kumar Vishal, Vineet Bera, Abhisek Ranjan Chakraborty, Hirak Jyoti Das, Sasti Gopal |
author_sort | Ganguli, Sayak |
collection | PubMed |
description | With the advent of age of big data and advances in high throughput technology accessing data has become one of the most important step in the entire knowledge discovery process. Most users are not able to decipher the query result that is obtained when non specific keywords or a combination of keywords are used. Intelligent access to sequence and structure databases (IASSD) is a desktop application for windows operating system. It is written in Java and utilizes the web service description language (wsdl) files and Jar files of E-utilities of various databases such as National Centre for Biotechnology Information (NCBI) and Protein Data Bank (PDB). Apart from that IASSD allows the user to view protein structure using a JMOL application which supports conditional editing. AVAILABILITY: The Jar file is freely available through e-mail from the corresponding author. |
format | Online Article Text |
id | pubmed-4312370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-43123702015-02-10 Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases Ganguli, Sayak Gupta, Manoj Kumar Basu, Protip Banik, Rahul Singh, Pankaj Kumar Vishal, Vineet Bera, Abhisek Ranjan Chakraborty, Hirak Jyoti Das, Sasti Gopal Bioinformation Database With the advent of age of big data and advances in high throughput technology accessing data has become one of the most important step in the entire knowledge discovery process. Most users are not able to decipher the query result that is obtained when non specific keywords or a combination of keywords are used. Intelligent access to sequence and structure databases (IASSD) is a desktop application for windows operating system. It is written in Java and utilizes the web service description language (wsdl) files and Jar files of E-utilities of various databases such as National Centre for Biotechnology Information (NCBI) and Protein Data Bank (PDB). Apart from that IASSD allows the user to view protein structure using a JMOL application which supports conditional editing. AVAILABILITY: The Jar file is freely available through e-mail from the corresponding author. Biomedical Informatics 2014-12-31 /pmc/articles/PMC4312370/ /pubmed/25670880 http://dx.doi.org/10.6026/97320630010764 Text en © 2014 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Database Ganguli, Sayak Gupta, Manoj Kumar Basu, Protip Banik, Rahul Singh, Pankaj Kumar Vishal, Vineet Bera, Abhisek Ranjan Chakraborty, Hirak Jyoti Das, Sasti Gopal Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases |
title | Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases |
title_full | Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases |
title_fullStr | Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases |
title_full_unstemmed | Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases |
title_short | Intelligent Access to Sequence and Structure Databases (IASSD) − an interface for accessing information from major web databases |
title_sort | intelligent access to sequence and structure databases (iassd) − an interface for accessing information from major web databases |
topic | Database |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312370/ https://www.ncbi.nlm.nih.gov/pubmed/25670880 http://dx.doi.org/10.6026/97320630010764 |
work_keys_str_mv | AT gangulisayak intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT guptamanojkumar intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT basuprotip intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT banikrahul intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT singhpankajkumar intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT vishalvineet intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT beraabhisekranjan intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT chakrabortyhirakjyoti intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases AT dassastigopal intelligentaccesstosequenceandstructuredatabasesiassdaninterfaceforaccessinginformationfrommajorwebdatabases |