Cargando…

Novel Curvularia species from clinical specimens

The fungal genus Curvularia includes numerous plant pathogens and some emerging opportunistic pathogens of humans. In a previous study we used morphology and sequences of the nuclear ribosomal internal transcribed spacer region (ITS) and the glyceraldehyde-3-phosphate dehydrogenase (gpd) gene to ide...

Descripción completa

Detalles Bibliográficos
Autores principales: Madrid, H., da Cunha, K.C., Gené, J., Dijksterhuis, J., Cano, J., Sutton, D.A., Guarro, J., Crous, P.W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Naturalis Biodiversity Center & Centraallbureau voor Schimmelcultures 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312937/
https://www.ncbi.nlm.nih.gov/pubmed/25737593
http://dx.doi.org/10.3767/003158514X683538
_version_ 1782355182152056832
author Madrid, H.
da Cunha, K.C.
Gené, J.
Dijksterhuis, J.
Cano, J.
Sutton, D.A.
Guarro, J.
Crous, P.W.
author_facet Madrid, H.
da Cunha, K.C.
Gené, J.
Dijksterhuis, J.
Cano, J.
Sutton, D.A.
Guarro, J.
Crous, P.W.
author_sort Madrid, H.
collection PubMed
description The fungal genus Curvularia includes numerous plant pathogens and some emerging opportunistic pathogens of humans. In a previous study we used morphology and sequences of the nuclear ribosomal internal transcribed spacer region (ITS) and the glyceraldehyde-3-phosphate dehydrogenase (gpd) gene to identify species within a set of 99 clinical Curvularia isolates from the USA. Seventy-two isolates could be identified while the remaining 27 isolates belonged in three unclassified clades that were tentatively labelled Curvularia sp. I, II and III. In the present study, we further assess the taxonomic placement of these isolates using sequences of ITS, gpd, the large subunit rDNA, and the second largest subunit of RNA polymerase II. DNA sequence comparisons with a set of 87 isolates representing 33 Curvularia spp. and members of the closely-related genera Bipolaris and Exserohilum revealed that Curvularia sp. I, II and III represent novel lineages in Curvularia. These lineages are morphologically different from the currently accepted species. In the phylogenetic tree, Curvularia sp. I and sp. III were each split into two distinct lineages. Morphology and phylogeny supported the proposal of five new species, to be named C. americana, C. chlamydospora, C. hominis, C. muehlenbeckiae and C. pseudolunata. The concatenated 4-locus phylogeny revealed the existence of six clades in Curvularia, which are associated with particular morphological features. They were named after representative species, namely americana, eragrostidis, hominis, lunata, spicifera and trifolii.
format Online
Article
Text
id pubmed-4312937
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Naturalis Biodiversity Center & Centraallbureau voor Schimmelcultures
record_format MEDLINE/PubMed
spelling pubmed-43129372015-03-03 Novel Curvularia species from clinical specimens Madrid, H. da Cunha, K.C. Gené, J. Dijksterhuis, J. Cano, J. Sutton, D.A. Guarro, J. Crous, P.W. Persoonia Research Article The fungal genus Curvularia includes numerous plant pathogens and some emerging opportunistic pathogens of humans. In a previous study we used morphology and sequences of the nuclear ribosomal internal transcribed spacer region (ITS) and the glyceraldehyde-3-phosphate dehydrogenase (gpd) gene to identify species within a set of 99 clinical Curvularia isolates from the USA. Seventy-two isolates could be identified while the remaining 27 isolates belonged in three unclassified clades that were tentatively labelled Curvularia sp. I, II and III. In the present study, we further assess the taxonomic placement of these isolates using sequences of ITS, gpd, the large subunit rDNA, and the second largest subunit of RNA polymerase II. DNA sequence comparisons with a set of 87 isolates representing 33 Curvularia spp. and members of the closely-related genera Bipolaris and Exserohilum revealed that Curvularia sp. I, II and III represent novel lineages in Curvularia. These lineages are morphologically different from the currently accepted species. In the phylogenetic tree, Curvularia sp. I and sp. III were each split into two distinct lineages. Morphology and phylogeny supported the proposal of five new species, to be named C. americana, C. chlamydospora, C. hominis, C. muehlenbeckiae and C. pseudolunata. The concatenated 4-locus phylogeny revealed the existence of six clades in Curvularia, which are associated with particular morphological features. They were named after representative species, namely americana, eragrostidis, hominis, lunata, spicifera and trifolii. Naturalis Biodiversity Center & Centraallbureau voor Schimmelcultures 2014-07-29 2014-12 /pmc/articles/PMC4312937/ /pubmed/25737593 http://dx.doi.org/10.3767/003158514X683538 Text en © 2014 Naturalis Biodiversity Center & Centraalbureau voor Schimmelcultures http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights.
spellingShingle Research Article
Madrid, H.
da Cunha, K.C.
Gené, J.
Dijksterhuis, J.
Cano, J.
Sutton, D.A.
Guarro, J.
Crous, P.W.
Novel Curvularia species from clinical specimens
title Novel Curvularia species from clinical specimens
title_full Novel Curvularia species from clinical specimens
title_fullStr Novel Curvularia species from clinical specimens
title_full_unstemmed Novel Curvularia species from clinical specimens
title_short Novel Curvularia species from clinical specimens
title_sort novel curvularia species from clinical specimens
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312937/
https://www.ncbi.nlm.nih.gov/pubmed/25737593
http://dx.doi.org/10.3767/003158514X683538
work_keys_str_mv AT madridh novelcurvulariaspeciesfromclinicalspecimens
AT dacunhakc novelcurvulariaspeciesfromclinicalspecimens
AT genej novelcurvulariaspeciesfromclinicalspecimens
AT dijksterhuisj novelcurvulariaspeciesfromclinicalspecimens
AT canoj novelcurvulariaspeciesfromclinicalspecimens
AT suttonda novelcurvulariaspeciesfromclinicalspecimens
AT guarroj novelcurvulariaspeciesfromclinicalspecimens
AT crouspw novelcurvulariaspeciesfromclinicalspecimens