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The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era

Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan distribution. Many names have not been used consistently and in some instances the same species has been described two or more times under separate names. This study focuses on subg. Phlegmacium as traditionally...

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Autores principales: Liimatainen, K., Niskanen, T., Dima, B., Kytövuori, I., Ammirati, J.F., Frøslev, T.G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Naturalis Biodiversity Center & Centraallbureau voor Schimmelcultures 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312940/
https://www.ncbi.nlm.nih.gov/pubmed/25737596
http://dx.doi.org/10.3767/003158514X684681
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author Liimatainen, K.
Niskanen, T.
Dima, B.
Kytövuori, I.
Ammirati, J.F.
Frøslev, T.G.
author_facet Liimatainen, K.
Niskanen, T.
Dima, B.
Kytövuori, I.
Ammirati, J.F.
Frøslev, T.G.
author_sort Liimatainen, K.
collection PubMed
description Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan distribution. Many names have not been used consistently and in some instances the same species has been described two or more times under separate names. This study focuses on subg. Phlegmacium as traditionally defined and includes species from boreal and temperate areas of the northern hemisphere. Our goals for this project were to: i) study type material to determine which species already have been described; ii) stabilize the use of Friesian and other older names by choosing a neo- or epitype; iii) describe new species that were discovered during the process of studying specimens; and iv) establish an accurate ITS barcoding database for Phlegmacium species. A total of 236 types representing 154 species were studied. Of these 114 species are described only once whereas 40 species had one ore more synonyms. Of the names studied only 61 were currently represented in GenBank. Neotypes are proposed for 21 species, and epitypes are designated for three species. In addition, 20 new species are described and six new combinations made. As a consequence ITS barcodes for 175 Cortinarius species are released.
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spelling pubmed-43129402015-03-03 The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era Liimatainen, K. Niskanen, T. Dima, B. Kytövuori, I. Ammirati, J.F. Frøslev, T.G. Persoonia Research Article Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan distribution. Many names have not been used consistently and in some instances the same species has been described two or more times under separate names. This study focuses on subg. Phlegmacium as traditionally defined and includes species from boreal and temperate areas of the northern hemisphere. Our goals for this project were to: i) study type material to determine which species already have been described; ii) stabilize the use of Friesian and other older names by choosing a neo- or epitype; iii) describe new species that were discovered during the process of studying specimens; and iv) establish an accurate ITS barcoding database for Phlegmacium species. A total of 236 types representing 154 species were studied. Of these 114 species are described only once whereas 40 species had one ore more synonyms. Of the names studied only 61 were currently represented in GenBank. Neotypes are proposed for 21 species, and epitypes are designated for three species. In addition, 20 new species are described and six new combinations made. As a consequence ITS barcodes for 175 Cortinarius species are released. Naturalis Biodiversity Center & Centraallbureau voor Schimmelcultures 2014-09-08 2014-12 /pmc/articles/PMC4312940/ /pubmed/25737596 http://dx.doi.org/10.3767/003158514X684681 Text en © 2014 Naturalis Biodiversity Center & Centraalbureau voor Schimmelcultures http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights.
spellingShingle Research Article
Liimatainen, K.
Niskanen, T.
Dima, B.
Kytövuori, I.
Ammirati, J.F.
Frøslev, T.G.
The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era
title The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era
title_full The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era
title_fullStr The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era
title_full_unstemmed The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era
title_short The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era
title_sort largest type study of agaricales species to date: bringing identification and nomenclature of phlegmacium (cortinarius) into the dna era
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312940/
https://www.ncbi.nlm.nih.gov/pubmed/25737596
http://dx.doi.org/10.3767/003158514X684681
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