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Influence of reactive species on the modification of biomolecules generated from the soft plasma
Plasma medicine is an upcoming research area that has attracted the scientists to explore more deeply the utility of plasma. So, apart from the treating biomaterials and tissues with plasma, we have studied the effect of soft plasma with different feeding gases such as Air, N(2) and Ar on modificati...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4316168/ https://www.ncbi.nlm.nih.gov/pubmed/25649786 http://dx.doi.org/10.1038/srep08221 |
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author | Attri, Pankaj Kumar, Naresh Park, Ji Hoon Yadav, Dharmendra Kumar Choi, Sooho Uhm, Han S. Kim, In Tae Choi, Eun Ha Lee, Weontae |
author_facet | Attri, Pankaj Kumar, Naresh Park, Ji Hoon Yadav, Dharmendra Kumar Choi, Sooho Uhm, Han S. Kim, In Tae Choi, Eun Ha Lee, Weontae |
author_sort | Attri, Pankaj |
collection | PubMed |
description | Plasma medicine is an upcoming research area that has attracted the scientists to explore more deeply the utility of plasma. So, apart from the treating biomaterials and tissues with plasma, we have studied the effect of soft plasma with different feeding gases such as Air, N(2) and Ar on modification of biomolecules. Hence, in this work we have used the soft plasma on biomolecules such as proteins ((Hemoglobin (Hb) and Myoglobin (Mb)), calf thymus DNA and amino acids. The structural changes or structural modification of proteins and DNA have been studied using circular dichroism (CD), fluorescence spectroscopy, protein oxidation test, gel electrophoresis, UV-vis spectroscopy, dynamic light scattering (DLS) and 1D NMR, while Liquid Chromatograph/Capillary Electrophoresis-Mass Spectrometer (LC/CE-MS) based on qualitative and quantitative bio-analysis have been used to study the modification of amino acids. Further, the thermal analysis of the protein has been studied with differential scanning calorimetry (DSC) and CD. Additionally, we have performed docking studies of H(2)O(2) with Hb and Mb, which reveals that H(2)O(2) molecules preferably attack the amino acids near heme group. We have also shown that N(2) gas plasma has strong deformation action on biomolecules and compared to other gases plasma. |
format | Online Article Text |
id | pubmed-4316168 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-43161682015-02-11 Influence of reactive species on the modification of biomolecules generated from the soft plasma Attri, Pankaj Kumar, Naresh Park, Ji Hoon Yadav, Dharmendra Kumar Choi, Sooho Uhm, Han S. Kim, In Tae Choi, Eun Ha Lee, Weontae Sci Rep Article Plasma medicine is an upcoming research area that has attracted the scientists to explore more deeply the utility of plasma. So, apart from the treating biomaterials and tissues with plasma, we have studied the effect of soft plasma with different feeding gases such as Air, N(2) and Ar on modification of biomolecules. Hence, in this work we have used the soft plasma on biomolecules such as proteins ((Hemoglobin (Hb) and Myoglobin (Mb)), calf thymus DNA and amino acids. The structural changes or structural modification of proteins and DNA have been studied using circular dichroism (CD), fluorescence spectroscopy, protein oxidation test, gel electrophoresis, UV-vis spectroscopy, dynamic light scattering (DLS) and 1D NMR, while Liquid Chromatograph/Capillary Electrophoresis-Mass Spectrometer (LC/CE-MS) based on qualitative and quantitative bio-analysis have been used to study the modification of amino acids. Further, the thermal analysis of the protein has been studied with differential scanning calorimetry (DSC) and CD. Additionally, we have performed docking studies of H(2)O(2) with Hb and Mb, which reveals that H(2)O(2) molecules preferably attack the amino acids near heme group. We have also shown that N(2) gas plasma has strong deformation action on biomolecules and compared to other gases plasma. Nature Publishing Group 2015-02-04 /pmc/articles/PMC4316168/ /pubmed/25649786 http://dx.doi.org/10.1038/srep08221 Text en Copyright © 2015, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/4.0/ |
spellingShingle | Article Attri, Pankaj Kumar, Naresh Park, Ji Hoon Yadav, Dharmendra Kumar Choi, Sooho Uhm, Han S. Kim, In Tae Choi, Eun Ha Lee, Weontae Influence of reactive species on the modification of biomolecules generated from the soft plasma |
title | Influence of reactive species on the modification of biomolecules generated from the soft plasma |
title_full | Influence of reactive species on the modification of biomolecules generated from the soft plasma |
title_fullStr | Influence of reactive species on the modification of biomolecules generated from the soft plasma |
title_full_unstemmed | Influence of reactive species on the modification of biomolecules generated from the soft plasma |
title_short | Influence of reactive species on the modification of biomolecules generated from the soft plasma |
title_sort | influence of reactive species on the modification of biomolecules generated from the soft plasma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4316168/ https://www.ncbi.nlm.nih.gov/pubmed/25649786 http://dx.doi.org/10.1038/srep08221 |
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