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A spectrum of sharing: maximization of information content for brain imaging data
Efforts to expand sharing of neuroimaging data have been growing exponentially in recent years. There are several different types of data sharing which can be considered to fall along a spectrum, ranging from simpler and less informative to more complex and more informative. In this paper we conside...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4316396/ https://www.ncbi.nlm.nih.gov/pubmed/25653850 http://dx.doi.org/10.1186/s13742-014-0042-5 |
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author | Calhoun, Vince D |
author_facet | Calhoun, Vince D |
author_sort | Calhoun, Vince D |
collection | PubMed |
description | Efforts to expand sharing of neuroimaging data have been growing exponentially in recent years. There are several different types of data sharing which can be considered to fall along a spectrum, ranging from simpler and less informative to more complex and more informative. In this paper we consider this spectrum for three domains: data capture, data density, and data analysis. Here the focus is on the right end of the spectrum, that is, how to maximize the information content while addressing the challenges. A summary of associated challenges of and possible solutions is presented in this review and includes: 1) a discussion of tools to monitor quality of data as it is collected and encourage adoption of data mapping standards; 2) sharing of time-series data (not just summary maps or regions); and 3) the use of analytic approaches which maximize sharing potential as much as possible. Examples of existing solutions for each of these points, which we developed in our lab, are also discussed including the use of a comprehensive beginning-to-end neuroinformatics platform and the use of flexible analytic approaches, such as independent component analysis and multivariate classification approaches, such as deep learning. |
format | Online Article Text |
id | pubmed-4316396 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-43163962015-02-05 A spectrum of sharing: maximization of information content for brain imaging data Calhoun, Vince D Gigascience Review Efforts to expand sharing of neuroimaging data have been growing exponentially in recent years. There are several different types of data sharing which can be considered to fall along a spectrum, ranging from simpler and less informative to more complex and more informative. In this paper we consider this spectrum for three domains: data capture, data density, and data analysis. Here the focus is on the right end of the spectrum, that is, how to maximize the information content while addressing the challenges. A summary of associated challenges of and possible solutions is presented in this review and includes: 1) a discussion of tools to monitor quality of data as it is collected and encourage adoption of data mapping standards; 2) sharing of time-series data (not just summary maps or regions); and 3) the use of analytic approaches which maximize sharing potential as much as possible. Examples of existing solutions for each of these points, which we developed in our lab, are also discussed including the use of a comprehensive beginning-to-end neuroinformatics platform and the use of flexible analytic approaches, such as independent component analysis and multivariate classification approaches, such as deep learning. BioMed Central 2015-01-29 /pmc/articles/PMC4316396/ /pubmed/25653850 http://dx.doi.org/10.1186/s13742-014-0042-5 Text en © Calhoun; licensee BioMed Central. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Review Calhoun, Vince D A spectrum of sharing: maximization of information content for brain imaging data |
title | A spectrum of sharing: maximization of information content for brain imaging data |
title_full | A spectrum of sharing: maximization of information content for brain imaging data |
title_fullStr | A spectrum of sharing: maximization of information content for brain imaging data |
title_full_unstemmed | A spectrum of sharing: maximization of information content for brain imaging data |
title_short | A spectrum of sharing: maximization of information content for brain imaging data |
title_sort | spectrum of sharing: maximization of information content for brain imaging data |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4316396/ https://www.ncbi.nlm.nih.gov/pubmed/25653850 http://dx.doi.org/10.1186/s13742-014-0042-5 |
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