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A spectrum of sharing: maximization of information content for brain imaging data

Efforts to expand sharing of neuroimaging data have been growing exponentially in recent years. There are several different types of data sharing which can be considered to fall along a spectrum, ranging from simpler and less informative to more complex and more informative. In this paper we conside...

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Autor principal: Calhoun, Vince D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4316396/
https://www.ncbi.nlm.nih.gov/pubmed/25653850
http://dx.doi.org/10.1186/s13742-014-0042-5
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author Calhoun, Vince D
author_facet Calhoun, Vince D
author_sort Calhoun, Vince D
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description Efforts to expand sharing of neuroimaging data have been growing exponentially in recent years. There are several different types of data sharing which can be considered to fall along a spectrum, ranging from simpler and less informative to more complex and more informative. In this paper we consider this spectrum for three domains: data capture, data density, and data analysis. Here the focus is on the right end of the spectrum, that is, how to maximize the information content while addressing the challenges. A summary of associated challenges of and possible solutions is presented in this review and includes: 1) a discussion of tools to monitor quality of data as it is collected and encourage adoption of data mapping standards; 2) sharing of time-series data (not just summary maps or regions); and 3) the use of analytic approaches which maximize sharing potential as much as possible. Examples of existing solutions for each of these points, which we developed in our lab, are also discussed including the use of a comprehensive beginning-to-end neuroinformatics platform and the use of flexible analytic approaches, such as independent component analysis and multivariate classification approaches, such as deep learning.
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spelling pubmed-43163962015-02-05 A spectrum of sharing: maximization of information content for brain imaging data Calhoun, Vince D Gigascience Review Efforts to expand sharing of neuroimaging data have been growing exponentially in recent years. There are several different types of data sharing which can be considered to fall along a spectrum, ranging from simpler and less informative to more complex and more informative. In this paper we consider this spectrum for three domains: data capture, data density, and data analysis. Here the focus is on the right end of the spectrum, that is, how to maximize the information content while addressing the challenges. A summary of associated challenges of and possible solutions is presented in this review and includes: 1) a discussion of tools to monitor quality of data as it is collected and encourage adoption of data mapping standards; 2) sharing of time-series data (not just summary maps or regions); and 3) the use of analytic approaches which maximize sharing potential as much as possible. Examples of existing solutions for each of these points, which we developed in our lab, are also discussed including the use of a comprehensive beginning-to-end neuroinformatics platform and the use of flexible analytic approaches, such as independent component analysis and multivariate classification approaches, such as deep learning. BioMed Central 2015-01-29 /pmc/articles/PMC4316396/ /pubmed/25653850 http://dx.doi.org/10.1186/s13742-014-0042-5 Text en © Calhoun; licensee BioMed Central. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Review
Calhoun, Vince D
A spectrum of sharing: maximization of information content for brain imaging data
title A spectrum of sharing: maximization of information content for brain imaging data
title_full A spectrum of sharing: maximization of information content for brain imaging data
title_fullStr A spectrum of sharing: maximization of information content for brain imaging data
title_full_unstemmed A spectrum of sharing: maximization of information content for brain imaging data
title_short A spectrum of sharing: maximization of information content for brain imaging data
title_sort spectrum of sharing: maximization of information content for brain imaging data
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4316396/
https://www.ncbi.nlm.nih.gov/pubmed/25653850
http://dx.doi.org/10.1186/s13742-014-0042-5
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