Cargando…

Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods

Sorting and identifying chromosomes, a process known as karyotyping, is widely used to detect changes in chromosome shapes and gene positions. In a karyotype the chromosomes are identified by their size and therefore this process can be performed by measuring macroscopic structural variables. Chromo...

Descripción completa

Detalles Bibliográficos
Autores principales: Shemilt, Laura, Verbanis, Ephanielle, Schwenke, Joerg, Estandarte, Ana K., Xiong, Gang, Harder, Ross, Parmar, Neha, Yusuf, Mohammed, Zhang, Fucai, Robinson, Ian K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Biophysical Society 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4317545/
https://www.ncbi.nlm.nih.gov/pubmed/25650937
http://dx.doi.org/10.1016/j.bpj.2014.11.3456
_version_ 1782355702786818048
author Shemilt, Laura
Verbanis, Ephanielle
Schwenke, Joerg
Estandarte, Ana K.
Xiong, Gang
Harder, Ross
Parmar, Neha
Yusuf, Mohammed
Zhang, Fucai
Robinson, Ian K.
author_facet Shemilt, Laura
Verbanis, Ephanielle
Schwenke, Joerg
Estandarte, Ana K.
Xiong, Gang
Harder, Ross
Parmar, Neha
Yusuf, Mohammed
Zhang, Fucai
Robinson, Ian K.
author_sort Shemilt, Laura
collection PubMed
description Sorting and identifying chromosomes, a process known as karyotyping, is widely used to detect changes in chromosome shapes and gene positions. In a karyotype the chromosomes are identified by their size and therefore this process can be performed by measuring macroscopic structural variables. Chromosomes contain a specific number of basepairs that linearly correlate with their size; therefore, it is possible to perform a karyotype on chromosomes using their mass as an identifying factor. Here, we obtain the first images, to our knowledge, of chromosomes using the novel imaging method of ptychography. We can use the images to measure the mass of chromosomes and perform a partial karyotype from the results. We also obtain high spatial resolution using this technique with synchrotron source x-rays.
format Online
Article
Text
id pubmed-4317545
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher The Biophysical Society
record_format MEDLINE/PubMed
spelling pubmed-43175452015-07-10 Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods Shemilt, Laura Verbanis, Ephanielle Schwenke, Joerg Estandarte, Ana K. Xiong, Gang Harder, Ross Parmar, Neha Yusuf, Mohammed Zhang, Fucai Robinson, Ian K. Biophys J Proteins and Nucleic Acids Sorting and identifying chromosomes, a process known as karyotyping, is widely used to detect changes in chromosome shapes and gene positions. In a karyotype the chromosomes are identified by their size and therefore this process can be performed by measuring macroscopic structural variables. Chromosomes contain a specific number of basepairs that linearly correlate with their size; therefore, it is possible to perform a karyotype on chromosomes using their mass as an identifying factor. Here, we obtain the first images, to our knowledge, of chromosomes using the novel imaging method of ptychography. We can use the images to measure the mass of chromosomes and perform a partial karyotype from the results. We also obtain high spatial resolution using this technique with synchrotron source x-rays. The Biophysical Society 2015-02-03 /pmc/articles/PMC4317545/ /pubmed/25650937 http://dx.doi.org/10.1016/j.bpj.2014.11.3456 Text en © 2015 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Proteins and Nucleic Acids
Shemilt, Laura
Verbanis, Ephanielle
Schwenke, Joerg
Estandarte, Ana K.
Xiong, Gang
Harder, Ross
Parmar, Neha
Yusuf, Mohammed
Zhang, Fucai
Robinson, Ian K.
Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods
title Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods
title_full Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods
title_fullStr Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods
title_full_unstemmed Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods
title_short Karyotyping Human Chromosomes by Optical and X-Ray Ptychography Methods
title_sort karyotyping human chromosomes by optical and x-ray ptychography methods
topic Proteins and Nucleic Acids
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4317545/
https://www.ncbi.nlm.nih.gov/pubmed/25650937
http://dx.doi.org/10.1016/j.bpj.2014.11.3456
work_keys_str_mv AT shemiltlaura karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT verbanisephanielle karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT schwenkejoerg karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT estandarteanak karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT xionggang karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT harderross karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT parmarneha karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT yusufmohammed karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT zhangfucai karyotypinghumanchromosomesbyopticalandxrayptychographymethods
AT robinsoniank karyotypinghumanchromosomesbyopticalandxrayptychographymethods