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Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples
Invasive trichosporonosis is a deep mycosis found mainly in immunocompromised hosts, and the major pathogen is Trichosporon asahii. We detected the species-specific intergenic spacers (IGS) of rRNA gene of T. asahii using a loop-mediated isothermal amplification (LAMP) assay in 15 isolates with 3 di...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4322298/ https://www.ncbi.nlm.nih.gov/pubmed/25692144 http://dx.doi.org/10.1155/2015/732573 |
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author | Zhou, Jianfeng Liao, Yong Li, Haitao Lu, Xuelian Han, Xiufeng Tian, Yanli Chen, Shanshan Yang, Rongya |
author_facet | Zhou, Jianfeng Liao, Yong Li, Haitao Lu, Xuelian Han, Xiufeng Tian, Yanli Chen, Shanshan Yang, Rongya |
author_sort | Zhou, Jianfeng |
collection | PubMed |
description | Invasive trichosporonosis is a deep mycosis found mainly in immunocompromised hosts, and the major pathogen is Trichosporon asahii. We detected the species-specific intergenic spacers (IGS) of rRNA gene of T. asahii using a loop-mediated isothermal amplification (LAMP) assay in 15 isolates with 3 different visualization methods, including SYBR green detection, gel electrophoresis, and turbidimetric methods. The LAMP assay displayed superior rapidity to other traditional methods in the detection time; that is, only 1 h was needed for detection and identification of the pathogen DNA. Furthermore, the detection limit of the LAMP assay was more sensitive than the PCR assay. We also successfully detect the presence of T. asahii in samples from experimentally infected mice and samples from patients with invasive trichosporonosis caused by T. asahii, suggesting that this method may become useful in clinical applications in the near future. |
format | Online Article Text |
id | pubmed-4322298 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-43222982015-02-17 Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples Zhou, Jianfeng Liao, Yong Li, Haitao Lu, Xuelian Han, Xiufeng Tian, Yanli Chen, Shanshan Yang, Rongya Biomed Res Int Research Article Invasive trichosporonosis is a deep mycosis found mainly in immunocompromised hosts, and the major pathogen is Trichosporon asahii. We detected the species-specific intergenic spacers (IGS) of rRNA gene of T. asahii using a loop-mediated isothermal amplification (LAMP) assay in 15 isolates with 3 different visualization methods, including SYBR green detection, gel electrophoresis, and turbidimetric methods. The LAMP assay displayed superior rapidity to other traditional methods in the detection time; that is, only 1 h was needed for detection and identification of the pathogen DNA. Furthermore, the detection limit of the LAMP assay was more sensitive than the PCR assay. We also successfully detect the presence of T. asahii in samples from experimentally infected mice and samples from patients with invasive trichosporonosis caused by T. asahii, suggesting that this method may become useful in clinical applications in the near future. Hindawi Publishing Corporation 2015 2015-01-27 /pmc/articles/PMC4322298/ /pubmed/25692144 http://dx.doi.org/10.1155/2015/732573 Text en Copyright © 2015 Jianfeng Zhou et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhou, Jianfeng Liao, Yong Li, Haitao Lu, Xuelian Han, Xiufeng Tian, Yanli Chen, Shanshan Yang, Rongya Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples |
title | Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples |
title_full | Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples |
title_fullStr | Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples |
title_full_unstemmed | Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples |
title_short | Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples |
title_sort | development of a loop-mediated isothermal amplification assay for rapid detection of trichosporon asahii in experimental and clinical samples |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4322298/ https://www.ncbi.nlm.nih.gov/pubmed/25692144 http://dx.doi.org/10.1155/2015/732573 |
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