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Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples

Invasive trichosporonosis is a deep mycosis found mainly in immunocompromised hosts, and the major pathogen is Trichosporon asahii. We detected the species-specific intergenic spacers (IGS) of rRNA gene of T. asahii using a loop-mediated isothermal amplification (LAMP) assay in 15 isolates with 3 di...

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Autores principales: Zhou, Jianfeng, Liao, Yong, Li, Haitao, Lu, Xuelian, Han, Xiufeng, Tian, Yanli, Chen, Shanshan, Yang, Rongya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4322298/
https://www.ncbi.nlm.nih.gov/pubmed/25692144
http://dx.doi.org/10.1155/2015/732573
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author Zhou, Jianfeng
Liao, Yong
Li, Haitao
Lu, Xuelian
Han, Xiufeng
Tian, Yanli
Chen, Shanshan
Yang, Rongya
author_facet Zhou, Jianfeng
Liao, Yong
Li, Haitao
Lu, Xuelian
Han, Xiufeng
Tian, Yanli
Chen, Shanshan
Yang, Rongya
author_sort Zhou, Jianfeng
collection PubMed
description Invasive trichosporonosis is a deep mycosis found mainly in immunocompromised hosts, and the major pathogen is Trichosporon asahii. We detected the species-specific intergenic spacers (IGS) of rRNA gene of T. asahii using a loop-mediated isothermal amplification (LAMP) assay in 15 isolates with 3 different visualization methods, including SYBR green detection, gel electrophoresis, and turbidimetric methods. The LAMP assay displayed superior rapidity to other traditional methods in the detection time; that is, only 1 h was needed for detection and identification of the pathogen DNA. Furthermore, the detection limit of the LAMP assay was more sensitive than the PCR assay. We also successfully detect the presence of T. asahii in samples from experimentally infected mice and samples from patients with invasive trichosporonosis caused by T. asahii, suggesting that this method may become useful in clinical applications in the near future.
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spelling pubmed-43222982015-02-17 Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples Zhou, Jianfeng Liao, Yong Li, Haitao Lu, Xuelian Han, Xiufeng Tian, Yanli Chen, Shanshan Yang, Rongya Biomed Res Int Research Article Invasive trichosporonosis is a deep mycosis found mainly in immunocompromised hosts, and the major pathogen is Trichosporon asahii. We detected the species-specific intergenic spacers (IGS) of rRNA gene of T. asahii using a loop-mediated isothermal amplification (LAMP) assay in 15 isolates with 3 different visualization methods, including SYBR green detection, gel electrophoresis, and turbidimetric methods. The LAMP assay displayed superior rapidity to other traditional methods in the detection time; that is, only 1 h was needed for detection and identification of the pathogen DNA. Furthermore, the detection limit of the LAMP assay was more sensitive than the PCR assay. We also successfully detect the presence of T. asahii in samples from experimentally infected mice and samples from patients with invasive trichosporonosis caused by T. asahii, suggesting that this method may become useful in clinical applications in the near future. Hindawi Publishing Corporation 2015 2015-01-27 /pmc/articles/PMC4322298/ /pubmed/25692144 http://dx.doi.org/10.1155/2015/732573 Text en Copyright © 2015 Jianfeng Zhou et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhou, Jianfeng
Liao, Yong
Li, Haitao
Lu, Xuelian
Han, Xiufeng
Tian, Yanli
Chen, Shanshan
Yang, Rongya
Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples
title Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples
title_full Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples
title_fullStr Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples
title_full_unstemmed Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples
title_short Development of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Trichosporon asahii in Experimental and Clinical Samples
title_sort development of a loop-mediated isothermal amplification assay for rapid detection of trichosporon asahii in experimental and clinical samples
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4322298/
https://www.ncbi.nlm.nih.gov/pubmed/25692144
http://dx.doi.org/10.1155/2015/732573
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