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Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia

A systematized survey was conducted to find soil-borne microbes that degrade cellulose in soils from unique ecosystems, such as the Superpáramo, Páramo, and the High Andean Forest in the Nevados National Natural Park (NNNP), Colombia. These high mountain ecosystems represent extreme environments, su...

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Autores principales: Avellaneda-Torres, Lizeth Manuela, Pulido, Claudia Patricia Guevara, Rojas, Esperanza Torres
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Microbiologia 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4323293/
https://www.ncbi.nlm.nih.gov/pubmed/25763024
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author Avellaneda-Torres, Lizeth Manuela
Pulido, Claudia Patricia Guevara
Rojas, Esperanza Torres
author_facet Avellaneda-Torres, Lizeth Manuela
Pulido, Claudia Patricia Guevara
Rojas, Esperanza Torres
author_sort Avellaneda-Torres, Lizeth Manuela
collection PubMed
description A systematized survey was conducted to find soil-borne microbes that degrade cellulose in soils from unique ecosystems, such as the Superpáramo, Páramo, and the High Andean Forest in the Nevados National Natural Park (NNNP), Colombia. These high mountain ecosystems represent extreme environments, such as high levels of solar radiation, low atmospheric pressure, and extreme daily changes in temperature. Cellulolytic activity of the microorganisms was evaluated using qualitative tests, such as growth in selective media followed by staining with congo red and iodine, and quantitative tests to determine the activity of endoglucanase, β-glucosidase, exoglucanase, and total cellulase. Microorganisms were identified using molecular markers, such as the 16S rRNA gene for bacteria and the internal transcribed spacer region (ITS) of ribosomal DNA for fungi. Multivariate statistical analysis (MVA) was used to select microorganisms with high cellulolytic capacity. A total of 108 microorganisms were isolated from the soils and, in general, the enzymatic activities of fungi were higher than those of bacteria. Our results also found that none of the organisms studied were able to degrade all the components of the cellulose and it is therefore suggested that a combination of bacteria and/or fungi with various enzymatic activities be used to obtain high total cellulolytic activity. This study gives an overview of the potential microorganism that could be used for cellulose degradation in various biotechnological applications and for sustainable agricultural waste treatment.
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spelling pubmed-43232932015-04-04 Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia Avellaneda-Torres, Lizeth Manuela Pulido, Claudia Patricia Guevara Rojas, Esperanza Torres Braz J Microbiol Environmental Microbiology A systematized survey was conducted to find soil-borne microbes that degrade cellulose in soils from unique ecosystems, such as the Superpáramo, Páramo, and the High Andean Forest in the Nevados National Natural Park (NNNP), Colombia. These high mountain ecosystems represent extreme environments, such as high levels of solar radiation, low atmospheric pressure, and extreme daily changes in temperature. Cellulolytic activity of the microorganisms was evaluated using qualitative tests, such as growth in selective media followed by staining with congo red and iodine, and quantitative tests to determine the activity of endoglucanase, β-glucosidase, exoglucanase, and total cellulase. Microorganisms were identified using molecular markers, such as the 16S rRNA gene for bacteria and the internal transcribed spacer region (ITS) of ribosomal DNA for fungi. Multivariate statistical analysis (MVA) was used to select microorganisms with high cellulolytic capacity. A total of 108 microorganisms were isolated from the soils and, in general, the enzymatic activities of fungi were higher than those of bacteria. Our results also found that none of the organisms studied were able to degrade all the components of the cellulose and it is therefore suggested that a combination of bacteria and/or fungi with various enzymatic activities be used to obtain high total cellulolytic activity. This study gives an overview of the potential microorganism that could be used for cellulose degradation in various biotechnological applications and for sustainable agricultural waste treatment. Sociedade Brasileira de Microbiologia 2015-03-04 /pmc/articles/PMC4323293/ /pubmed/25763024 Text en Copyright © 2014, Sociedade Brasileira de Microbiologia All the content of the journal, except where otherwise noted, is licensed under a Creative Commons License CC BY-NC.
spellingShingle Environmental Microbiology
Avellaneda-Torres, Lizeth Manuela
Pulido, Claudia Patricia Guevara
Rojas, Esperanza Torres
Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia
title Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia
title_full Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia
title_fullStr Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia
title_full_unstemmed Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia
title_short Assessment of cellulolytic microorganisms in soils of Nevados Park, Colombia
title_sort assessment of cellulolytic microorganisms in soils of nevados park, colombia
topic Environmental Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4323293/
https://www.ncbi.nlm.nih.gov/pubmed/25763024
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