Cargando…
Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients
BACKGROUND: Heritable Thoracic Aortic Disorders (H-TAD) may present clinically as part of a syndromic entity or as an isolated (nonsyndromic) manifestation. About one dozen genes are now available for clinical molecular testing. Targeted single gene testing is hampered by significant clinical overla...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326194/ https://www.ncbi.nlm.nih.gov/pubmed/25644172 http://dx.doi.org/10.1186/s13023-014-0221-6 |
_version_ | 1782356892857663488 |
---|---|
author | Campens, Laurence Callewaert, Bert Muiño Mosquera, Laura Renard, Marjolijn Symoens, Sofie De Paepe, Anne Coucke, Paul De Backer, Julie |
author_facet | Campens, Laurence Callewaert, Bert Muiño Mosquera, Laura Renard, Marjolijn Symoens, Sofie De Paepe, Anne Coucke, Paul De Backer, Julie |
author_sort | Campens, Laurence |
collection | PubMed |
description | BACKGROUND: Heritable Thoracic Aortic Disorders (H-TAD) may present clinically as part of a syndromic entity or as an isolated (nonsyndromic) manifestation. About one dozen genes are now available for clinical molecular testing. Targeted single gene testing is hampered by significant clinical overlap between syndromic H-TAD entities and the absence of discriminating features in isolated cases. Therefore panel testing of multiple genes has now emerged as the preferred approach. So far, no data on mutation detection rate with this technique have been reported. METHODS: We performed Next Generation Sequencing (NGS) based screening of the seven currently most prevalent H-TAD-associated genes (FBN1, TGFBR1/2, TGFB2, SMAD3, ACTA2 and COL3A1) on 264 samples from unrelated probands referred for H-TAD and related entities. Patients fulfilling the criteria for Marfan syndrome (MFS) were only included if targeted FBN1 sequencing and MLPA analysis were negative. RESULTS: A mutation was identified in 34 patients (13%): 12 FBN1, one TGFBR1, two TGFBR2, three TGFB2, nine SMAD3, four ACTA2 and three COL3A1 mutations. We found mutations in FBN1 (N = 3), TGFBR2 (N = 1) and COL3A1 (N = 2) in patients without characteristic clinical features of syndromal H-TAD. Six TAD patients harboring a mutation in SMAD3 and one TAD patient with a TGFB2 mutation fulfilled the diagnostic criteria for MFS. CONCLUSION: NGS based H-TAD panel testing efficiently reveals a mutation in 13% of patients. Our observations emphasize the clinical overlap between patients harboring mutations in syndromic and nonsyndromic H-TAD related genes as well as within syndromic H-TAD entities, justifying a widespread application of this technique. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13023-014-0221-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4326194 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-43261942015-02-13 Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients Campens, Laurence Callewaert, Bert Muiño Mosquera, Laura Renard, Marjolijn Symoens, Sofie De Paepe, Anne Coucke, Paul De Backer, Julie Orphanet J Rare Dis Research BACKGROUND: Heritable Thoracic Aortic Disorders (H-TAD) may present clinically as part of a syndromic entity or as an isolated (nonsyndromic) manifestation. About one dozen genes are now available for clinical molecular testing. Targeted single gene testing is hampered by significant clinical overlap between syndromic H-TAD entities and the absence of discriminating features in isolated cases. Therefore panel testing of multiple genes has now emerged as the preferred approach. So far, no data on mutation detection rate with this technique have been reported. METHODS: We performed Next Generation Sequencing (NGS) based screening of the seven currently most prevalent H-TAD-associated genes (FBN1, TGFBR1/2, TGFB2, SMAD3, ACTA2 and COL3A1) on 264 samples from unrelated probands referred for H-TAD and related entities. Patients fulfilling the criteria for Marfan syndrome (MFS) were only included if targeted FBN1 sequencing and MLPA analysis were negative. RESULTS: A mutation was identified in 34 patients (13%): 12 FBN1, one TGFBR1, two TGFBR2, three TGFB2, nine SMAD3, four ACTA2 and three COL3A1 mutations. We found mutations in FBN1 (N = 3), TGFBR2 (N = 1) and COL3A1 (N = 2) in patients without characteristic clinical features of syndromal H-TAD. Six TAD patients harboring a mutation in SMAD3 and one TAD patient with a TGFB2 mutation fulfilled the diagnostic criteria for MFS. CONCLUSION: NGS based H-TAD panel testing efficiently reveals a mutation in 13% of patients. Our observations emphasize the clinical overlap between patients harboring mutations in syndromic and nonsyndromic H-TAD related genes as well as within syndromic H-TAD entities, justifying a widespread application of this technique. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13023-014-0221-6) contains supplementary material, which is available to authorized users. BioMed Central 2015-02-03 /pmc/articles/PMC4326194/ /pubmed/25644172 http://dx.doi.org/10.1186/s13023-014-0221-6 Text en © Campens et al.; licensee BioMed Central. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Campens, Laurence Callewaert, Bert Muiño Mosquera, Laura Renard, Marjolijn Symoens, Sofie De Paepe, Anne Coucke, Paul De Backer, Julie Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients |
title | Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients |
title_full | Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients |
title_fullStr | Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients |
title_full_unstemmed | Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients |
title_short | Gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients |
title_sort | gene panel sequencing in heritable thoracic aortic disorders and related entities – results of comprehensive testing in a cohort of 264 patients |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326194/ https://www.ncbi.nlm.nih.gov/pubmed/25644172 http://dx.doi.org/10.1186/s13023-014-0221-6 |
work_keys_str_mv | AT campenslaurence genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients AT callewaertbert genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients AT muinomosqueralaura genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients AT renardmarjolijn genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients AT symoenssofie genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients AT depaepeanne genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients AT couckepaul genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients AT debackerjulie genepanelsequencinginheritablethoracicaorticdisordersandrelatedentitiesresultsofcomprehensivetestinginacohortof264patients |