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Estimating the spatial position of marine mammals based on digital camera recordings

Estimating the spatial position of organisms is essential to quantify interactions between the organism and the characteristics of its surroundings, for example, predator–prey interactions, habitat selection, and social associations. Because marine mammals spend most of their time under water and ma...

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Autores principales: Hoekendijk, Jeroen P A, de Vries, Jurre, van der Bolt, Krissy, Greinert, Jens, Brasseur, Sophie, Camphuysen, Kees C J, Aarts, Geert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BlackWell Publishing Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4328763/
https://www.ncbi.nlm.nih.gov/pubmed/25691982
http://dx.doi.org/10.1002/ece3.1353
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author Hoekendijk, Jeroen P A
de Vries, Jurre
van der Bolt, Krissy
Greinert, Jens
Brasseur, Sophie
Camphuysen, Kees C J
Aarts, Geert
author_facet Hoekendijk, Jeroen P A
de Vries, Jurre
van der Bolt, Krissy
Greinert, Jens
Brasseur, Sophie
Camphuysen, Kees C J
Aarts, Geert
author_sort Hoekendijk, Jeroen P A
collection PubMed
description Estimating the spatial position of organisms is essential to quantify interactions between the organism and the characteristics of its surroundings, for example, predator–prey interactions, habitat selection, and social associations. Because marine mammals spend most of their time under water and may appear at the surface only briefly, determining their exact geographic location can be challenging. Here, we developed a photogrammetric method to accurately estimate the spatial position of marine mammals or birds at the sea surface. Digital recordings containing landscape features with known geographic coordinates can be used to estimate the distance and bearing of each sighting relative to the observation point. The method can correct for frame rotation, estimates pixel size based on the reference points, and can be applied to scenarios with and without a visible horizon. A set of R functions was written to process the images and obtain accurate geographic coordinates for each sighting. The method is applied to estimate the spatiotemporal fine-scale distribution of harbour porpoises in a tidal inlet. Video recordings of harbour porpoises were made from land, using a standard digital single-lens reflex (DSLR) camera, positioned at a height of 9.59 m above mean sea level. Porpoises were detected up to a distance of ∽3136 m (mean 596 m), with a mean location error of 12 m. The method presented here allows for multiple detections of different individuals within a single video frame and for tracking movements of individuals based on repeated sightings. In comparison with traditional methods, this method only requires a digital camera to provide accurate location estimates. It especially has great potential in regions with ample data on local (a)biotic conditions, to help resolve functional mechanisms underlying habitat selection and other behaviors in marine mammals in coastal areas.
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spelling pubmed-43287632015-02-17 Estimating the spatial position of marine mammals based on digital camera recordings Hoekendijk, Jeroen P A de Vries, Jurre van der Bolt, Krissy Greinert, Jens Brasseur, Sophie Camphuysen, Kees C J Aarts, Geert Ecol Evol Original Research Estimating the spatial position of organisms is essential to quantify interactions between the organism and the characteristics of its surroundings, for example, predator–prey interactions, habitat selection, and social associations. Because marine mammals spend most of their time under water and may appear at the surface only briefly, determining their exact geographic location can be challenging. Here, we developed a photogrammetric method to accurately estimate the spatial position of marine mammals or birds at the sea surface. Digital recordings containing landscape features with known geographic coordinates can be used to estimate the distance and bearing of each sighting relative to the observation point. The method can correct for frame rotation, estimates pixel size based on the reference points, and can be applied to scenarios with and without a visible horizon. A set of R functions was written to process the images and obtain accurate geographic coordinates for each sighting. The method is applied to estimate the spatiotemporal fine-scale distribution of harbour porpoises in a tidal inlet. Video recordings of harbour porpoises were made from land, using a standard digital single-lens reflex (DSLR) camera, positioned at a height of 9.59 m above mean sea level. Porpoises were detected up to a distance of ∽3136 m (mean 596 m), with a mean location error of 12 m. The method presented here allows for multiple detections of different individuals within a single video frame and for tracking movements of individuals based on repeated sightings. In comparison with traditional methods, this method only requires a digital camera to provide accurate location estimates. It especially has great potential in regions with ample data on local (a)biotic conditions, to help resolve functional mechanisms underlying habitat selection and other behaviors in marine mammals in coastal areas. BlackWell Publishing Ltd 2015-02 2015-01-08 /pmc/articles/PMC4328763/ /pubmed/25691982 http://dx.doi.org/10.1002/ece3.1353 Text en © 2015 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Hoekendijk, Jeroen P A
de Vries, Jurre
van der Bolt, Krissy
Greinert, Jens
Brasseur, Sophie
Camphuysen, Kees C J
Aarts, Geert
Estimating the spatial position of marine mammals based on digital camera recordings
title Estimating the spatial position of marine mammals based on digital camera recordings
title_full Estimating the spatial position of marine mammals based on digital camera recordings
title_fullStr Estimating the spatial position of marine mammals based on digital camera recordings
title_full_unstemmed Estimating the spatial position of marine mammals based on digital camera recordings
title_short Estimating the spatial position of marine mammals based on digital camera recordings
title_sort estimating the spatial position of marine mammals based on digital camera recordings
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4328763/
https://www.ncbi.nlm.nih.gov/pubmed/25691982
http://dx.doi.org/10.1002/ece3.1353
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