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Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures
The structures of a series of complexes with general formula n[Pd(pza)X]Y·mH(2)O (n = 1, 2; X = Cl, Br, I, N(3), NCS; Y = NO(3), I, N(3), [Pd(SCN)(4)]; m = 0, 0.5, 1) have been determined, where pza is the tridentate ligand bis[2-(3,5-dimethylpyrazol-1-yl)ethyl]amine, C(14)H(23)N(5). In all comp...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4331852/ https://www.ncbi.nlm.nih.gov/pubmed/25705441 http://dx.doi.org/10.1107/S205698901402595X |
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author | Mendoza, María de los Angeles Bernès, Sylvain Mendoza-Díaz, Guillermo |
author_facet | Mendoza, María de los Angeles Bernès, Sylvain Mendoza-Díaz, Guillermo |
author_sort | Mendoza, María de los Angeles |
collection | PubMed |
description | The structures of a series of complexes with general formula n[Pd(pza)X]Y·mH(2)O (n = 1, 2; X = Cl, Br, I, N(3), NCS; Y = NO(3), I, N(3), [Pd(SCN)(4)]; m = 0, 0.5, 1) have been determined, where pza is the tridentate ligand bis[2-(3,5-dimethylpyrazol-1-yl)ethyl]amine, C(14)H(23)N(5). In all complexes, {bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}chloridopalladium nitrate, [Pd(pza)Cl]NO(3), (1), {bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}bromidopalladium nitrate, [Pd(pza)Br]NO(3), (2), {bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}iodidopalladium iodide hemihydrate, [Pd(pza)I]I·0.5H(2)O, (3), azido{bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}palladium azide monohydrate, [Pd(pza)N(3)]N(3)·H(2)O, (4), and bis[{bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}(thiocyanato-κN)palladium] tetrakis(thiocyanato-κS)palladate, [Pd(pza)NCS](2)[Pd(SCN)(4)], (5), the [Pd(pza)X](+) complex cation displays a square-planar coordination geometry, and the pza ligand is twisted, approximating twofold rotation symmetry. Although the pza ligand is found with the same conformation along the series, the dihedral angle between pyrazole rings depends on the co-ligand X. This angle span the range 79.0 (3)–88.6 (1)° for the studied complexes. In (3), two complex cations, two I(−) anions and one water molecule of crystallization are present in the asymmetric unit. In (5), the central amine group of pza is disordered over two positions [occupancy ratio 0.770 (18):0.230 (18)]. The complex [Pd(SCN)(4)](2−) anion of this compound exhibits inversion symmetry and shows the Pd(2+) transition metal cation likewise in a square-planar coordination environment. Compound (5) is also a rare occurrence of a non-polymeric compound in which the pseudohalide ligand NCS(−) behaves both as thiocyanate and isothiocyanate, i.e. is coordinating either through the N atom (in the cation) or the S atom (in the anion). |
format | Online Article Text |
id | pubmed-4331852 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-43318522015-02-20 Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures Mendoza, María de los Angeles Bernès, Sylvain Mendoza-Díaz, Guillermo Acta Crystallogr E Crystallogr Commun Research Communications The structures of a series of complexes with general formula n[Pd(pza)X]Y·mH(2)O (n = 1, 2; X = Cl, Br, I, N(3), NCS; Y = NO(3), I, N(3), [Pd(SCN)(4)]; m = 0, 0.5, 1) have been determined, where pza is the tridentate ligand bis[2-(3,5-dimethylpyrazol-1-yl)ethyl]amine, C(14)H(23)N(5). In all complexes, {bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}chloridopalladium nitrate, [Pd(pza)Cl]NO(3), (1), {bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}bromidopalladium nitrate, [Pd(pza)Br]NO(3), (2), {bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}iodidopalladium iodide hemihydrate, [Pd(pza)I]I·0.5H(2)O, (3), azido{bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}palladium azide monohydrate, [Pd(pza)N(3)]N(3)·H(2)O, (4), and bis[{bis[2-(3,5-dimethylpyrazol-1-yl-κN (2))ethyl]amine-κN}(thiocyanato-κN)palladium] tetrakis(thiocyanato-κS)palladate, [Pd(pza)NCS](2)[Pd(SCN)(4)], (5), the [Pd(pza)X](+) complex cation displays a square-planar coordination geometry, and the pza ligand is twisted, approximating twofold rotation symmetry. Although the pza ligand is found with the same conformation along the series, the dihedral angle between pyrazole rings depends on the co-ligand X. This angle span the range 79.0 (3)–88.6 (1)° for the studied complexes. In (3), two complex cations, two I(−) anions and one water molecule of crystallization are present in the asymmetric unit. In (5), the central amine group of pza is disordered over two positions [occupancy ratio 0.770 (18):0.230 (18)]. The complex [Pd(SCN)(4)](2−) anion of this compound exhibits inversion symmetry and shows the Pd(2+) transition metal cation likewise in a square-planar coordination environment. Compound (5) is also a rare occurrence of a non-polymeric compound in which the pseudohalide ligand NCS(−) behaves both as thiocyanate and isothiocyanate, i.e. is coordinating either through the N atom (in the cation) or the S atom (in the anion). International Union of Crystallography 2015-01-01 /pmc/articles/PMC4331852/ /pubmed/25705441 http://dx.doi.org/10.1107/S205698901402595X Text en © Mendoza et al. 2015 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Mendoza, María de los Angeles Bernès, Sylvain Mendoza-Díaz, Guillermo Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures |
title | Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures
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title_full | Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures
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title_fullStr | Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures
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title_full_unstemmed | Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures
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title_short | Coordination of bis(pyrazol-1-yl)amine to palladium(II): influence of the co-ligands and counter-ions on the molecular and crystal structures
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title_sort | coordination of bis(pyrazol-1-yl)amine to palladium(ii): influence of the co-ligands and counter-ions on the molecular and crystal structures |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4331852/ https://www.ncbi.nlm.nih.gov/pubmed/25705441 http://dx.doi.org/10.1107/S205698901402595X |
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