Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea

Bacterial communities at a CO(2) vent (pH 6.7) were compared with those at control (pH 8.0) and transition sites (pH 7.6) using 16S rRNA metagenomics. Firmicutes and unclassified bacteria dominated across all sites, Proteobacteria, especially Gammaproteobacteria, declined, and Epsilonproteobacteria...

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Detalles Bibliográficos
Autores principales: Chauhan, Ashvini, Pathak, Ashish, Rodolfo-Metalpa, Riccardo, Milazzo, Marco, Green, Stefan J., Hall-Spencer, Jason M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2015
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333660/
https://www.ncbi.nlm.nih.gov/pubmed/25676760
http://dx.doi.org/10.1128/genomeA.01543-14
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author Chauhan, Ashvini
Pathak, Ashish
Rodolfo-Metalpa, Riccardo
Milazzo, Marco
Green, Stefan J.
Hall-Spencer, Jason M.
author_facet Chauhan, Ashvini
Pathak, Ashish
Rodolfo-Metalpa, Riccardo
Milazzo, Marco
Green, Stefan J.
Hall-Spencer, Jason M.
author_sort Chauhan, Ashvini
collection PubMed
description Bacterial communities at a CO(2) vent (pH 6.7) were compared with those at control (pH 8.0) and transition sites (pH 7.6) using 16S rRNA metagenomics. Firmicutes and unclassified bacteria dominated across all sites, Proteobacteria, especially Gammaproteobacteria, declined, and Epsilonproteobacteria increased in the vent with an increase in Bacteroidetes at both the vent and transition sites.
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spelling pubmed-43336602015-02-20 Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea Chauhan, Ashvini Pathak, Ashish Rodolfo-Metalpa, Riccardo Milazzo, Marco Green, Stefan J. Hall-Spencer, Jason M. Genome Announc Prokaryotes Bacterial communities at a CO(2) vent (pH 6.7) were compared with those at control (pH 8.0) and transition sites (pH 7.6) using 16S rRNA metagenomics. Firmicutes and unclassified bacteria dominated across all sites, Proteobacteria, especially Gammaproteobacteria, declined, and Epsilonproteobacteria increased in the vent with an increase in Bacteroidetes at both the vent and transition sites. American Society for Microbiology 2015-02-12 /pmc/articles/PMC4333660/ /pubmed/25676760 http://dx.doi.org/10.1128/genomeA.01543-14 Text en Copyright © 2015 Chauhan et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Chauhan, Ashvini
Pathak, Ashish
Rodolfo-Metalpa, Riccardo
Milazzo, Marco
Green, Stefan J.
Hall-Spencer, Jason M.
Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea
title Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea
title_full Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea
title_fullStr Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea
title_full_unstemmed Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea
title_short Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO(2) Gradient in the Mediterranean Sea
title_sort metagenomics reveals planktonic bacterial community shifts across a natural co(2) gradient in the mediterranean sea
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333660/
https://www.ncbi.nlm.nih.gov/pubmed/25676760
http://dx.doi.org/10.1128/genomeA.01543-14
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