Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain

The complete genome sequence of a new isolate of squash mosaic virus (SqMV) infecting squash plants in Spain was obtained using deep sequencing of small RNAs. The low nucleotide sequence identities, with only 87 to 88% for RNA1 and 84 to 86% for RNA2 to known SqMV isolates, suggested that this isola...

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Detalles Bibliográficos
Autores principales: Li, Rugang, Gao, Shan, Berendsen, Sven, Fei, Zhangjun, Ling, Kai-Shu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2015
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333673/
https://www.ncbi.nlm.nih.gov/pubmed/25676773
http://dx.doi.org/10.1128/genomeA.01583-14
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author Li, Rugang
Gao, Shan
Berendsen, Sven
Fei, Zhangjun
Ling, Kai-Shu
author_facet Li, Rugang
Gao, Shan
Berendsen, Sven
Fei, Zhangjun
Ling, Kai-Shu
author_sort Li, Rugang
collection PubMed
description The complete genome sequence of a new isolate of squash mosaic virus (SqMV) infecting squash plants in Spain was obtained using deep sequencing of small RNAs. The low nucleotide sequence identities, with only 87 to 88% for RNA1 and 84 to 86% for RNA2 to known SqMV isolates, suggested that this isolate belongs to a novel genotype.
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spelling pubmed-43336732015-02-20 Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain Li, Rugang Gao, Shan Berendsen, Sven Fei, Zhangjun Ling, Kai-Shu Genome Announc Viruses The complete genome sequence of a new isolate of squash mosaic virus (SqMV) infecting squash plants in Spain was obtained using deep sequencing of small RNAs. The low nucleotide sequence identities, with only 87 to 88% for RNA1 and 84 to 86% for RNA2 to known SqMV isolates, suggested that this isolate belongs to a novel genotype. American Society for Microbiology 2015-02-12 /pmc/articles/PMC4333673/ /pubmed/25676773 http://dx.doi.org/10.1128/genomeA.01583-14 Text en Copyright © 2015 Li et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Viruses
Li, Rugang
Gao, Shan
Berendsen, Sven
Fei, Zhangjun
Ling, Kai-Shu
Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain
title Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain
title_full Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain
title_fullStr Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain
title_full_unstemmed Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain
title_short Complete Genome Sequence of a Novel Genotype of Squash Mosaic Virus Infecting Squash in Spain
title_sort complete genome sequence of a novel genotype of squash mosaic virus infecting squash in spain
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333673/
https://www.ncbi.nlm.nih.gov/pubmed/25676773
http://dx.doi.org/10.1128/genomeA.01583-14
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