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Efficiently mining Adverse Event Reporting System for multiple drug interactions

Efficiently mining multiple drug interactions and reactions from Adverse Event Reporting System (AERS) is a challenging problem which has not been sufficiently addressed by existing methods. To tackle this challenge, we propose a FCI-fliter approach which leverages the efforts of UMLS mapping, frequ...

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Detalles Bibliográficos
Autores principales: Xiang, Yang, Albin, Aaron, Ren, Kaiyu, Zhang, Pengyue, Etter, Jonathan P., Lin, Simon, Li, Lang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Informatics Association 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333704/
https://www.ncbi.nlm.nih.gov/pubmed/25717411
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author Xiang, Yang
Albin, Aaron
Ren, Kaiyu
Zhang, Pengyue
Etter, Jonathan P.
Lin, Simon
Li, Lang
author_facet Xiang, Yang
Albin, Aaron
Ren, Kaiyu
Zhang, Pengyue
Etter, Jonathan P.
Lin, Simon
Li, Lang
author_sort Xiang, Yang
collection PubMed
description Efficiently mining multiple drug interactions and reactions from Adverse Event Reporting System (AERS) is a challenging problem which has not been sufficiently addressed by existing methods. To tackle this challenge, we propose a FCI-fliter approach which leverages the efforts of UMLS mapping, frequent closed itemset mining, and uninformative association identification and removal. By applying our method on AERS, we identified a large number of multiple drug interactions with reactions. By statistical analysis, we found most of the identified associations have very small p-values which suggest that they are statistically significant. Further analysis on the results shows that many multiple drug interactions and reactions are clinically interesting, and suggests that our method may be further improved with the combination of external knowledge.
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spelling pubmed-43337042015-02-25 Efficiently mining Adverse Event Reporting System for multiple drug interactions Xiang, Yang Albin, Aaron Ren, Kaiyu Zhang, Pengyue Etter, Jonathan P. Lin, Simon Li, Lang AMIA Jt Summits Transl Sci Proc Articles Efficiently mining multiple drug interactions and reactions from Adverse Event Reporting System (AERS) is a challenging problem which has not been sufficiently addressed by existing methods. To tackle this challenge, we propose a FCI-fliter approach which leverages the efforts of UMLS mapping, frequent closed itemset mining, and uninformative association identification and removal. By applying our method on AERS, we identified a large number of multiple drug interactions with reactions. By statistical analysis, we found most of the identified associations have very small p-values which suggest that they are statistically significant. Further analysis on the results shows that many multiple drug interactions and reactions are clinically interesting, and suggests that our method may be further improved with the combination of external knowledge. American Medical Informatics Association 2014-04-07 /pmc/articles/PMC4333704/ /pubmed/25717411 Text en ©2014 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
spellingShingle Articles
Xiang, Yang
Albin, Aaron
Ren, Kaiyu
Zhang, Pengyue
Etter, Jonathan P.
Lin, Simon
Li, Lang
Efficiently mining Adverse Event Reporting System for multiple drug interactions
title Efficiently mining Adverse Event Reporting System for multiple drug interactions
title_full Efficiently mining Adverse Event Reporting System for multiple drug interactions
title_fullStr Efficiently mining Adverse Event Reporting System for multiple drug interactions
title_full_unstemmed Efficiently mining Adverse Event Reporting System for multiple drug interactions
title_short Efficiently mining Adverse Event Reporting System for multiple drug interactions
title_sort efficiently mining adverse event reporting system for multiple drug interactions
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333704/
https://www.ncbi.nlm.nih.gov/pubmed/25717411
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