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Longitudinal Analysis of New Information Types in Clinical Notes
It is increasingly recognized that redundant information in clinical notes within electronic health record (EHR) systems is ubiquitous, significant, and may negatively impact the secondary use of these notes for research and patient care. We investigated several automated methods to identify redunda...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Medical Informatics Association
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333708/ https://www.ncbi.nlm.nih.gov/pubmed/25717418 |
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author | Zhang, Rui Pakhomov, Serguei Melton, Genevieve B. |
author_facet | Zhang, Rui Pakhomov, Serguei Melton, Genevieve B. |
author_sort | Zhang, Rui |
collection | PubMed |
description | It is increasingly recognized that redundant information in clinical notes within electronic health record (EHR) systems is ubiquitous, significant, and may negatively impact the secondary use of these notes for research and patient care. We investigated several automated methods to identify redundant versus relevant new information in clinical reports. These methods may provide a valuable approach to extract clinically pertinent information and further improve the accuracy of clinical information extraction systems. In this study, we used UMLS semantic types to extract several types of new information, including problems, medications, and laboratory information. Automatically identified new information highly correlated with manual reference standard annotations. Methods to identify different types of new information can potentially help to build up more robust information extraction systems for clinical researchers as well as aid clinicians and researchers in navigating clinical notes more effectively and quickly identify information pertaining to changes in health states. |
format | Online Article Text |
id | pubmed-4333708 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Medical Informatics Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-43337082015-02-25 Longitudinal Analysis of New Information Types in Clinical Notes Zhang, Rui Pakhomov, Serguei Melton, Genevieve B. AMIA Jt Summits Transl Sci Proc Articles It is increasingly recognized that redundant information in clinical notes within electronic health record (EHR) systems is ubiquitous, significant, and may negatively impact the secondary use of these notes for research and patient care. We investigated several automated methods to identify redundant versus relevant new information in clinical reports. These methods may provide a valuable approach to extract clinically pertinent information and further improve the accuracy of clinical information extraction systems. In this study, we used UMLS semantic types to extract several types of new information, including problems, medications, and laboratory information. Automatically identified new information highly correlated with manual reference standard annotations. Methods to identify different types of new information can potentially help to build up more robust information extraction systems for clinical researchers as well as aid clinicians and researchers in navigating clinical notes more effectively and quickly identify information pertaining to changes in health states. American Medical Informatics Association 2014-04-07 /pmc/articles/PMC4333708/ /pubmed/25717418 Text en ©2014 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose |
spellingShingle | Articles Zhang, Rui Pakhomov, Serguei Melton, Genevieve B. Longitudinal Analysis of New Information Types in Clinical Notes |
title | Longitudinal Analysis of New Information Types in Clinical Notes |
title_full | Longitudinal Analysis of New Information Types in Clinical Notes |
title_fullStr | Longitudinal Analysis of New Information Types in Clinical Notes |
title_full_unstemmed | Longitudinal Analysis of New Information Types in Clinical Notes |
title_short | Longitudinal Analysis of New Information Types in Clinical Notes |
title_sort | longitudinal analysis of new information types in clinical notes |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333708/ https://www.ncbi.nlm.nih.gov/pubmed/25717418 |
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