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Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598
Strains of a pink-pigmented Methylobacterium sp. are effective nitrogen- (N(2)) fixing microsymbionts of species of the African crotalarioid genus Listia. Strain WSM2598 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated in 2002 from a Listia bainesii root nodule collected at Estco...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4334988/ https://www.ncbi.nlm.nih.gov/pubmed/25780498 http://dx.doi.org/10.1186/1944-3277-9-5 |
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author | Ardley, Julie Tian, Rui Howieson, John Yates, Ron Bräu, Lambert Han, James Lobos, Elizabeth Huntemann, Marcel Chen, Amy Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Reeve, Wayne |
author_facet | Ardley, Julie Tian, Rui Howieson, John Yates, Ron Bräu, Lambert Han, James Lobos, Elizabeth Huntemann, Marcel Chen, Amy Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Reeve, Wayne |
author_sort | Ardley, Julie |
collection | PubMed |
description | Strains of a pink-pigmented Methylobacterium sp. are effective nitrogen- (N(2)) fixing microsymbionts of species of the African crotalarioid genus Listia. Strain WSM2598 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated in 2002 from a Listia bainesii root nodule collected at Estcourt Research Station in South Africa. Here we describe the features of Methylobacterium sp. WSM2598, together with information and annotation of a high-quality draft genome sequence. The 7,669,765 bp draft genome is arranged in 5 scaffolds of 83 contigs, contains 7,236 protein-coding genes and 18 RNA-only encoding genes. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 G enomic E ncyclopedia for B acteria and A rchaea- R oot N odule B acteria (GEBA-RNB) project. |
format | Online Article Text |
id | pubmed-4334988 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-43349882015-03-16 Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 Ardley, Julie Tian, Rui Howieson, John Yates, Ron Bräu, Lambert Han, James Lobos, Elizabeth Huntemann, Marcel Chen, Amy Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Reeve, Wayne Stand Genomic Sci Short Genome Report Strains of a pink-pigmented Methylobacterium sp. are effective nitrogen- (N(2)) fixing microsymbionts of species of the African crotalarioid genus Listia. Strain WSM2598 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated in 2002 from a Listia bainesii root nodule collected at Estcourt Research Station in South Africa. Here we describe the features of Methylobacterium sp. WSM2598, together with information and annotation of a high-quality draft genome sequence. The 7,669,765 bp draft genome is arranged in 5 scaffolds of 83 contigs, contains 7,236 protein-coding genes and 18 RNA-only encoding genes. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 G enomic E ncyclopedia for B acteria and A rchaea- R oot N odule B acteria (GEBA-RNB) project. BioMed Central 2014-12-08 /pmc/articles/PMC4334988/ /pubmed/25780498 http://dx.doi.org/10.1186/1944-3277-9-5 Text en Copyright © 2014 Ardley et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Ardley, Julie Tian, Rui Howieson, John Yates, Ron Bräu, Lambert Han, James Lobos, Elizabeth Huntemann, Marcel Chen, Amy Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Reeve, Wayne Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 |
title | Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 |
title_full | Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 |
title_fullStr | Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 |
title_full_unstemmed | Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 |
title_short | Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 |
title_sort | genome sequence of the dark pink pigmented listia bainesii microsymbiont methylobacterium sp. wsm2598 |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4334988/ https://www.ncbi.nlm.nih.gov/pubmed/25780498 http://dx.doi.org/10.1186/1944-3277-9-5 |
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