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Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae)

Tephrosia calophylla Bedd. (Fabaceae) is an endangered tropical plant endemic to southwestern Ghats, India. The objective of this study was to contribute to the characterisation of the diversity of this rare species, which is necessary for its future conservation. Accordingly, microsatellite markers...

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Autores principales: Parine, Narasimha Reddy, Lakshmi, P., Kumar, Devinder, Shaik, Jilani P., Alanazi, Mohammed, Pathan, Akbar Ali Khan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4336440/
https://www.ncbi.nlm.nih.gov/pubmed/25737647
http://dx.doi.org/10.1016/j.sjbs.2014.12.009
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author Parine, Narasimha Reddy
Lakshmi, P.
Kumar, Devinder
Shaik, Jilani P.
Alanazi, Mohammed
Pathan, Akbar Ali Khan
author_facet Parine, Narasimha Reddy
Lakshmi, P.
Kumar, Devinder
Shaik, Jilani P.
Alanazi, Mohammed
Pathan, Akbar Ali Khan
author_sort Parine, Narasimha Reddy
collection PubMed
description Tephrosia calophylla Bedd. (Fabaceae) is an endangered tropical plant endemic to southwestern Ghats, India. The objective of this study was to contribute to the characterisation of the diversity of this rare species, which is necessary for its future conservation. Accordingly, microsatellite markers were designed, and their ability to detect polymorphisms was determined. Nine microsatellite markers were developed using genomic libraries, and all of the markers were successfully amplified in 42 individuals. Three to nine alleles per locus were observed, and the heterozygosity of the loci ranged from 0.381 to 0.905. The nine newly developed polymorphic markers recognise a sufficient number of varying loci to perform further studies on the conservation and breeding of this medicinal cultivar.
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spelling pubmed-43364402015-03-03 Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae) Parine, Narasimha Reddy Lakshmi, P. Kumar, Devinder Shaik, Jilani P. Alanazi, Mohammed Pathan, Akbar Ali Khan Saudi J Biol Sci Original Article Tephrosia calophylla Bedd. (Fabaceae) is an endangered tropical plant endemic to southwestern Ghats, India. The objective of this study was to contribute to the characterisation of the diversity of this rare species, which is necessary for its future conservation. Accordingly, microsatellite markers were designed, and their ability to detect polymorphisms was determined. Nine microsatellite markers were developed using genomic libraries, and all of the markers were successfully amplified in 42 individuals. Three to nine alleles per locus were observed, and the heterozygosity of the loci ranged from 0.381 to 0.905. The nine newly developed polymorphic markers recognise a sufficient number of varying loci to perform further studies on the conservation and breeding of this medicinal cultivar. 2014-12-22 2015-03 /pmc/articles/PMC4336440/ /pubmed/25737647 http://dx.doi.org/10.1016/j.sjbs.2014.12.009 Text en © 2014 The Authors http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/).
spellingShingle Original Article
Parine, Narasimha Reddy
Lakshmi, P.
Kumar, Devinder
Shaik, Jilani P.
Alanazi, Mohammed
Pathan, Akbar Ali Khan
Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae)
title Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae)
title_full Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae)
title_fullStr Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae)
title_full_unstemmed Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae)
title_short Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae)
title_sort development and characterisation of nine polymorphic microsatellite markers for tephrosia calophylla bedd. (fabaceae)
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4336440/
https://www.ncbi.nlm.nih.gov/pubmed/25737647
http://dx.doi.org/10.1016/j.sjbs.2014.12.009
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