Cargando…

Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma

There have been numerous studies on the gene expression of connective tissue growth factor (CTGF) in colorectal cancer, however very few have investigated polymorphisms in this gene. The present study aimed to determine whether single nucleotide polymorphisms (SNPs) in the CTGF gene are associated w...

Descripción completa

Detalles Bibliográficos
Autores principales: AHMAD, ABRAR, ASKARI, SHLEAR, BEFEKADU, RAHEL, HAHN-STRÖMBERG, VICTORIA
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4337474/
https://www.ncbi.nlm.nih.gov/pubmed/25502877
http://dx.doi.org/10.3892/mmr.2014.3083
_version_ 1782481072097853440
author AHMAD, ABRAR
ASKARI, SHLEAR
BEFEKADU, RAHEL
HAHN-STRÖMBERG, VICTORIA
author_facet AHMAD, ABRAR
ASKARI, SHLEAR
BEFEKADU, RAHEL
HAHN-STRÖMBERG, VICTORIA
author_sort AHMAD, ABRAR
collection PubMed
description There have been numerous studies on the gene expression of connective tissue growth factor (CTGF) in colorectal cancer, however very few have investigated polymorphisms in this gene. The present study aimed to determine whether single nucleotide polymorphisms (SNPs) in the CTGF gene are associated with a higher susceptibility to colon cancer and/or an invasive tumor growth pattern. The CTGF gene was genotyped for seven SNPs (rs6918698, rs1931002, rs9493150, rs12526196, rs12527705, rs9399005 and rs12527379) by pyrosequencing. Formalin-fixed paraffin-embedded tissue samples (n=112) from patients diagnosed with colon carcinoma, and an equal number of blood samples from healthy controls, were selected for genomic DNA extraction. The complexity index was measured using images of tumor samples (n=64) stained for cytokeratin-8. The images were analyzed and correlated with the identified CTGF SNPs and clinicopathological parameters of the patients, including age, gender, tumor penetration, lymph node metastasis, systemic metastasis, differentiation and localization of tumor. It was demonstrated that the frequency of the SNP rs6918698 GG genotype was significantly associated (P=0.05) with an increased risk of colon cancer, as compared with the GC and CC genotypes. The other six SNPs (rs1931002, rs9493150, rs12526196, rs12527705, rs9399005 and rs12527379) exhibited no significant difference in the genotype and allele frequencies between patients diagnosed with colon carcinoma and the normal healthy population. A trend was observed between genotype variation at rs6918698 and the complexity index (P=0.052). The complexity index and genotypes for any of the studied SNPs were not significantly correlated with clinical or pathological parameters of the patients. These results indicate that the rs6918698 GG genotype is associated with an increased risk of developing colon carcinoma, and genetic variations at the rs6918698 are associated with the growth pattern of the tumor. The present results may facilitate the identification of potential biomarkers of the disease in addition to drug targets.
format Online
Article
Text
id pubmed-4337474
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher D.A. Spandidos
record_format MEDLINE/PubMed
spelling pubmed-43374742015-03-05 Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma AHMAD, ABRAR ASKARI, SHLEAR BEFEKADU, RAHEL HAHN-STRÖMBERG, VICTORIA Mol Med Rep Articles There have been numerous studies on the gene expression of connective tissue growth factor (CTGF) in colorectal cancer, however very few have investigated polymorphisms in this gene. The present study aimed to determine whether single nucleotide polymorphisms (SNPs) in the CTGF gene are associated with a higher susceptibility to colon cancer and/or an invasive tumor growth pattern. The CTGF gene was genotyped for seven SNPs (rs6918698, rs1931002, rs9493150, rs12526196, rs12527705, rs9399005 and rs12527379) by pyrosequencing. Formalin-fixed paraffin-embedded tissue samples (n=112) from patients diagnosed with colon carcinoma, and an equal number of blood samples from healthy controls, were selected for genomic DNA extraction. The complexity index was measured using images of tumor samples (n=64) stained for cytokeratin-8. The images were analyzed and correlated with the identified CTGF SNPs and clinicopathological parameters of the patients, including age, gender, tumor penetration, lymph node metastasis, systemic metastasis, differentiation and localization of tumor. It was demonstrated that the frequency of the SNP rs6918698 GG genotype was significantly associated (P=0.05) with an increased risk of colon cancer, as compared with the GC and CC genotypes. The other six SNPs (rs1931002, rs9493150, rs12526196, rs12527705, rs9399005 and rs12527379) exhibited no significant difference in the genotype and allele frequencies between patients diagnosed with colon carcinoma and the normal healthy population. A trend was observed between genotype variation at rs6918698 and the complexity index (P=0.052). The complexity index and genotypes for any of the studied SNPs were not significantly correlated with clinical or pathological parameters of the patients. These results indicate that the rs6918698 GG genotype is associated with an increased risk of developing colon carcinoma, and genetic variations at the rs6918698 are associated with the growth pattern of the tumor. The present results may facilitate the identification of potential biomarkers of the disease in addition to drug targets. D.A. Spandidos 2015-04 2014-12-11 /pmc/articles/PMC4337474/ /pubmed/25502877 http://dx.doi.org/10.3892/mmr.2014.3083 Text en Copyright © 2015, Spandidos Publications http://creativecommons.org/licenses/by/3.0 This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
spellingShingle Articles
AHMAD, ABRAR
ASKARI, SHLEAR
BEFEKADU, RAHEL
HAHN-STRÖMBERG, VICTORIA
Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma
title Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma
title_full Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma
title_fullStr Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma
title_full_unstemmed Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma
title_short Investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma
title_sort investigating the association between polymorphisms in connective tissue growth factor and susceptibility to colon carcinoma
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4337474/
https://www.ncbi.nlm.nih.gov/pubmed/25502877
http://dx.doi.org/10.3892/mmr.2014.3083
work_keys_str_mv AT ahmadabrar investigatingtheassociationbetweenpolymorphismsinconnectivetissuegrowthfactorandsusceptibilitytocoloncarcinoma
AT askarishlear investigatingtheassociationbetweenpolymorphismsinconnectivetissuegrowthfactorandsusceptibilitytocoloncarcinoma
AT befekadurahel investigatingtheassociationbetweenpolymorphismsinconnectivetissuegrowthfactorandsusceptibilitytocoloncarcinoma
AT hahnstrombergvictoria investigatingtheassociationbetweenpolymorphismsinconnectivetissuegrowthfactorandsusceptibilitytocoloncarcinoma