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Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach

In echo-planar imaging (EPI), such as commonly used for functional MRI (fMRI) and diffusion-tensor imaging (DTI), compressed distortion is a more difficult challenge than local stretching as spatial information can be lost in strongly compressed areas. In addition, the effects are more severe at ult...

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Autores principales: In, Myung-Ho, Posnansky, Oleg, Beall, Erik B., Lowe, Mark J., Speck, Oliver
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4338274/
https://www.ncbi.nlm.nih.gov/pubmed/25707006
http://dx.doi.org/10.1371/journal.pone.0116320
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author In, Myung-Ho
Posnansky, Oleg
Beall, Erik B.
Lowe, Mark J.
Speck, Oliver
author_facet In, Myung-Ho
Posnansky, Oleg
Beall, Erik B.
Lowe, Mark J.
Speck, Oliver
author_sort In, Myung-Ho
collection PubMed
description In echo-planar imaging (EPI), such as commonly used for functional MRI (fMRI) and diffusion-tensor imaging (DTI), compressed distortion is a more difficult challenge than local stretching as spatial information can be lost in strongly compressed areas. In addition, the effects are more severe at ultra-high field (UHF) such as 7T due to increased field inhomogeneity. To resolve this problem, two EPIs with opposite phase-encoding (PE) polarity were acquired and combined after distortion correction. For distortion correction, a point spread function (PSF) mapping method was chosen due to its high correction accuracy and extended to perform distortion correction of both EPIs with opposite PE polarity thus reducing the PSF reference scan time. Because the amount of spatial information differs between the opposite PE datasets, the method was further extended to incorporate a weighted combination of the two distortion-corrected images to maximize the spatial information content of a final corrected image. The correction accuracy of the proposed method was evaluated in distortion-corrected data using both forward and reverse phase-encoded PSF reference data and compared with the reversed gradient approaches suggested previously. Further we demonstrate that the extended PSF method with an improved weighted combination can recover local distortions and spatial information loss and be applied successfully not only to spin-echo EPI, but also to gradient-echo EPIs acquired with both PE directions to perform geometrically accurate image reconstruction.
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spelling pubmed-43382742015-03-04 Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach In, Myung-Ho Posnansky, Oleg Beall, Erik B. Lowe, Mark J. Speck, Oliver PLoS One Research Article In echo-planar imaging (EPI), such as commonly used for functional MRI (fMRI) and diffusion-tensor imaging (DTI), compressed distortion is a more difficult challenge than local stretching as spatial information can be lost in strongly compressed areas. In addition, the effects are more severe at ultra-high field (UHF) such as 7T due to increased field inhomogeneity. To resolve this problem, two EPIs with opposite phase-encoding (PE) polarity were acquired and combined after distortion correction. For distortion correction, a point spread function (PSF) mapping method was chosen due to its high correction accuracy and extended to perform distortion correction of both EPIs with opposite PE polarity thus reducing the PSF reference scan time. Because the amount of spatial information differs between the opposite PE datasets, the method was further extended to incorporate a weighted combination of the two distortion-corrected images to maximize the spatial information content of a final corrected image. The correction accuracy of the proposed method was evaluated in distortion-corrected data using both forward and reverse phase-encoded PSF reference data and compared with the reversed gradient approaches suggested previously. Further we demonstrate that the extended PSF method with an improved weighted combination can recover local distortions and spatial information loss and be applied successfully not only to spin-echo EPI, but also to gradient-echo EPIs acquired with both PE directions to perform geometrically accurate image reconstruction. Public Library of Science 2015-02-23 /pmc/articles/PMC4338274/ /pubmed/25707006 http://dx.doi.org/10.1371/journal.pone.0116320 Text en © 2015 In et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
In, Myung-Ho
Posnansky, Oleg
Beall, Erik B.
Lowe, Mark J.
Speck, Oliver
Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach
title Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach
title_full Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach
title_fullStr Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach
title_full_unstemmed Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach
title_short Distortion Correction in EPI Using an Extended PSF Method with a Reversed Phase Gradient Approach
title_sort distortion correction in epi using an extended psf method with a reversed phase gradient approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4338274/
https://www.ncbi.nlm.nih.gov/pubmed/25707006
http://dx.doi.org/10.1371/journal.pone.0116320
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