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Method for 3D Airway Topology Extraction

In lungs the number of conducting airway generations as well as bifurcation patterns varies across species and shows specific characteristics relating to illnesses or gene variations. A method to characterize the topology of the mouse airway tree using scanning laser optical tomography (SLOT) tomogr...

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Autores principales: Grothausmann, Roman, Kellner, Manuela, Heidrich, Marko, Lorbeer, Raoul-Amadeus, Ripken, Tammo, Meyer, Heiko, Kuehnel, Mark P., Ochs, Matthias, Rosenhahn, Bodo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4341850/
https://www.ncbi.nlm.nih.gov/pubmed/25767561
http://dx.doi.org/10.1155/2015/127010
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author Grothausmann, Roman
Kellner, Manuela
Heidrich, Marko
Lorbeer, Raoul-Amadeus
Ripken, Tammo
Meyer, Heiko
Kuehnel, Mark P.
Ochs, Matthias
Rosenhahn, Bodo
author_facet Grothausmann, Roman
Kellner, Manuela
Heidrich, Marko
Lorbeer, Raoul-Amadeus
Ripken, Tammo
Meyer, Heiko
Kuehnel, Mark P.
Ochs, Matthias
Rosenhahn, Bodo
author_sort Grothausmann, Roman
collection PubMed
description In lungs the number of conducting airway generations as well as bifurcation patterns varies across species and shows specific characteristics relating to illnesses or gene variations. A method to characterize the topology of the mouse airway tree using scanning laser optical tomography (SLOT) tomograms is presented in this paper. It is used to test discrimination between two types of mice based on detected differences in their conducting airway pattern. Based on segmentations of the airways in these tomograms, the main spanning tree of the volume skeleton is computed. The resulting graph structure is used to distinguish between wild type and surfactant protein (SP-D) deficient knock-out mice.
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spelling pubmed-43418502015-03-12 Method for 3D Airway Topology Extraction Grothausmann, Roman Kellner, Manuela Heidrich, Marko Lorbeer, Raoul-Amadeus Ripken, Tammo Meyer, Heiko Kuehnel, Mark P. Ochs, Matthias Rosenhahn, Bodo Comput Math Methods Med Research Article In lungs the number of conducting airway generations as well as bifurcation patterns varies across species and shows specific characteristics relating to illnesses or gene variations. A method to characterize the topology of the mouse airway tree using scanning laser optical tomography (SLOT) tomograms is presented in this paper. It is used to test discrimination between two types of mice based on detected differences in their conducting airway pattern. Based on segmentations of the airways in these tomograms, the main spanning tree of the volume skeleton is computed. The resulting graph structure is used to distinguish between wild type and surfactant protein (SP-D) deficient knock-out mice. Hindawi Publishing Corporation 2015 2015-02-12 /pmc/articles/PMC4341850/ /pubmed/25767561 http://dx.doi.org/10.1155/2015/127010 Text en Copyright © 2015 Roman Grothausmann et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Grothausmann, Roman
Kellner, Manuela
Heidrich, Marko
Lorbeer, Raoul-Amadeus
Ripken, Tammo
Meyer, Heiko
Kuehnel, Mark P.
Ochs, Matthias
Rosenhahn, Bodo
Method for 3D Airway Topology Extraction
title Method for 3D Airway Topology Extraction
title_full Method for 3D Airway Topology Extraction
title_fullStr Method for 3D Airway Topology Extraction
title_full_unstemmed Method for 3D Airway Topology Extraction
title_short Method for 3D Airway Topology Extraction
title_sort method for 3d airway topology extraction
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4341850/
https://www.ncbi.nlm.nih.gov/pubmed/25767561
http://dx.doi.org/10.1155/2015/127010
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