Cargando…

Discovery of Core Biotic Stress Responsive Genes in Arabidopsis by Weighted Gene Co-Expression Network Analysis

Intricate signal networks and transcriptional regulators translate the recognition of pathogens into defense responses. In this study, we carried out a gene co-expression analysis of all currently publicly available microarray data, which were generated in experiments that studied the interaction of...

Descripción completa

Detalles Bibliográficos
Autores principales:	Amrine, Katherine C. H., Blanco-Ulate, Barbara, Cantu, Dario
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4346582/ https://www.ncbi.nlm.nih.gov/pubmed/25730421 http://dx.doi.org/10.1371/journal.pone.0118731

Ejemplares similares

Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts
por: Blanco-Ulate, Barbara, et al.
Publicado: (2014)

Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens
por: Morales-Cruz, Abraham, et al.
Publicado: (2015)

Discovery of core genes in colorectal cancer by weighted gene co-expression network analysis
por: Liao, Cun, et al.
Publicado: (2019)

Comparative transcriptomics of Central Asian Vitis vinifera accessions reveals distinct defense strategies against powdery mildew
por: Amrine, Katherine C H, et al.
Publicado: (2015)

Tomato transcriptome and mutant analyses suggest a role for plant stress hormones in the interaction between fruit and Botrytis cinerea
por: Blanco-Ulate, Barbara, et al.
Publicado: (2013)

Draft Genome Sequence of the Ascomycete Phaeoacremonium aleophilum Strain UCR-PA7, a Causal Agent of the Esca Disease Complex in Grapevines
por: Blanco-Ulate, Barbara, et al.
Publicado: (2013)

Draft Genome Sequence of Neofusicoccum parvum Isolate UCR-NP2, a Fungal Vascular Pathogen Associated with Grapevine Cankers
por: Blanco-Ulate, Barbara, et al.
Publicado: (2013)

Draft Genome Sequence of the Grapevine Dieback Fungus Eutypa lata UCR-EL1
por: Blanco-Ulate, Barbara, et al.
Publicado: (2013)

Identification of Arabidopsis Candidate Genes in Response to Biotic and Abiotic Stresses Using Comparative Microarrays
por: Sham, Arjun, et al.
Publicado: (2015)

Unstable Transcripts in Arabidopsis Allotetraploids Are Associated with Nonadditive Gene Expression in Response to Abiotic and Biotic Stresses
por: Kim, Eun-Deok, et al.
Publicado: (2011)

Draft Genome Sequence of Botrytis cinerea BcDW1, Inoculum for Noble Rot of Grape Berries
por: Blanco-Ulate, Barbara, et al.
Publicado: (2013)

The Grape VlWRKY3 Gene Promotes Abiotic and Biotic Stress Tolerance in Transgenic Arabidopsis thaliana
por: Guo, Rongrong, et al.
Publicado: (2018)

Plant Defense Genes against Biotic Stresses
por: Diaz, Isabel
Publicado: (2018)

Induced tolerance to abiotic and biotic stresses of broccoli and Arabidopsis after treatment with elicitor molecules
por: Venegas-Molina, Jhon, et al.
Publicado: (2020)

Characterization of the Nrt2.6 Gene in Arabidopsis thaliana: A Link with Plant Response to Biotic and Abiotic Stress
por: Dechorgnat, Julie, et al.
Publicado: (2012)

The Trithorax Group Factor ULTRAPETALA1 Regulates Developmental as Well as Biotic and Abiotic Stress Response Genes in Arabidopsis
por: Tyler, Ludmila, et al.
Publicado: (2019)

The Arabidopsis gene co‐expression network
por: Burks, David J., et al.
Publicado: (2022)

Abiotic and biotic stresses induce a core transcriptome response in rice
por: Cohen, Stephen P., et al.
Publicado: (2019)

An Arabidopsis mutant impaired in intracellular calcium elevation is sensitive to biotic and abiotic stress
por: Michal Johnson, Joy, et al.
Publicado: (2014)

Biotic and Abiotic Stresses Activate Different Ca(2+) Permeable Channels in Arabidopsis
por: Cao, Xiao-Qiang, et al.
Publicado: (2017)

Biotic Stress-Induced Priming and De-Priming of Transcriptional Memory in Arabidopsis and Apple
por: Gully, Kay, et al.
Publicado: (2019)

Differential and tissue-specific activation pattern of the AtPROPEP and AtPEPR genes in response to biotic and abiotic stress in Arabidopsis thaliana
por: Safaeizadeh, Mehdi, et al.
Publicado: (2019)

A Meta-Analysis Reveals Opposite Effects of Biotic and Abiotic Stresses on Transcript Levels of Arabidopsis Intracellular Immune Receptor Genes
por: Yang, Leiyun, et al.
Publicado: (2021)

Nitrogen Limitation Alters the Response of Specific Genes to Biotic Stress
por: Farjad, Mahsa, et al.
Publicado: (2018)

Global gene expression analysis of transgenic, mannitol-producing, and salt-tolerant Arabidopsis thaliana indicates widespread changes in abiotic and biotic stress-related genes
por: Chan, Zhulong, et al.
Publicado: (2011)

Iso-Seq Allows Genome-Independent Transcriptome Profiling of Grape Berry Development
por: Minio, Andrea, et al.
Publicado: (2019)

Exogenous Abscisic Acid Promotes Anthocyanin Biosynthesis and Increased Expression of Flavonoid Synthesis Genes in Vitis vinifera × Vitis labrusca Table Grapes in a Subtropical Region
por: Koyama, Renata, et al.
Publicado: (2018)

Meta-Analysis of Common and Differential Transcriptomic Responses to Biotic and Abiotic Stresses in Arabidopsis thaliana
por: Biniaz, Yaser, et al.
Publicado: (2022)

The green ash transcriptome and identification of genes responding to abiotic and biotic stresses
por: Lane, Thomas, et al.
Publicado: (2016)

Computational deciphering of biotic stress associated genes in tomato (Solanum lycopersicum)
por: Tandon, G., et al.
Publicado: (2017)

Identification of core genes associated with different phosphorus levels in quinoa seedlings by weighted gene co-expression network analysis
por: Zhang, Shan, et al.
Publicado: (2023)

The Arabidopsis RNA Polymerase II Carboxyl Terminal Domain (CTD) Phosphatase-Like1 (CPL1) is a biotic stress susceptibility gene
por: Thatcher, Louise F., et al.
Publicado: (2018)

Chromosomal Distribution of Genes Conferring Tolerance to Abiotic Stresses Versus That of Genes Controlling Resistance to Biotic Stresses in Plants
por: Wang, Richard R.-C.
Publicado: (2020)

Identification and expression of CAMTA genes in Populus trichocarpa under biotic and abiotic stress
por: Wei, Ming, et al.
Publicado: (2017)

The Role of Tomato WRKY Genes in Plant Responses to Combined Abiotic and Biotic Stresses
por: Bai, Yuling, et al.
Publicado: (2018)

Available cloned genes and markers for genetic improvement of biotic stress resistance in rice
por: Simon, Eliza Vie, et al.
Publicado: (2023)

Molecular marker assisted gene stacking for biotic and abiotic stress resistance genes in an elite rice cultivar
por: Das, Gitishree, et al.
Publicado: (2015)

Genome-wide analyses of the mung bean NAC gene family reveals orthologs, co-expression networking and expression profiling under abiotic and biotic stresses
por: Tariq, Rezwan, et al.
Publicado: (2022)

Expression levels of inositol phosphorylceramide synthase modulate plant responses to biotic and abiotic stress in Arabidopsis thaliana
por: Pinneh, Elizabeth C., et al.
Publicado: (2019)

Post-flowering biotic and abiotic stresses impact nitrogen use efficiency and seed filling in Arabidopsis thaliana
por: Marmagne, Anne, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_pru77vvctv1fulak1sfnle1kr2