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16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil
Dye׳s residues in textile effluents are hazardous for humans and animals health. Such pollutants can be degraded into non-harmful molecules using biological approaches that are considered cheaper and ecologically safer. Isolated 15 bacterial cultures from soil that could be used in biological system...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4349931/ https://www.ncbi.nlm.nih.gov/pubmed/25780272 http://dx.doi.org/10.6026/97320630011001 |
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author | Kumar, Avnish Asthana, Monika Gupta, Poonam Yadav, Shweta Sharma, Deepti Singh, Km Neeraj Kumar, Sunil |
author_facet | Kumar, Avnish Asthana, Monika Gupta, Poonam Yadav, Shweta Sharma, Deepti Singh, Km Neeraj Kumar, Sunil |
author_sort | Kumar, Avnish |
collection | PubMed |
description | Dye׳s residues in textile effluents are hazardous for humans and animals health. Such pollutants can be degraded into non-harmful molecules using biological approaches that are considered cheaper and ecologically safer. Isolated 15 bacterial cultures from soil that could be used in biological system were showed decolorization capacity for Acid Green dye (33.9% to 94.0%) using thin layer chromatography and broth culture method. The most promising cultures (AMC3) to decolorize Acid green Dye (94.6%) was re-coded as NSDSUAM for submitting at IMTECH, Chandigarh for sequencing. The 16SrRNA sequencing suggested that it can be a variant of Pseudomonas geniculata (99.85% identical similarity) with difference of 2 base pairs to reference strain Pseudomonas geniculata ATCC 19374(T). Thus present study proposed dye decolorizing efficiency of the isolated strain of Pseudomonas geniculata that was previously unnoticed. The sequence is deposited in NCBI GenBank with the accession number KP238100. |
format | Online Article Text |
id | pubmed-4349931 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-43499312015-03-16 16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil Kumar, Avnish Asthana, Monika Gupta, Poonam Yadav, Shweta Sharma, Deepti Singh, Km Neeraj Kumar, Sunil Bioinformation Hypothesis Dye׳s residues in textile effluents are hazardous for humans and animals health. Such pollutants can be degraded into non-harmful molecules using biological approaches that are considered cheaper and ecologically safer. Isolated 15 bacterial cultures from soil that could be used in biological system were showed decolorization capacity for Acid Green dye (33.9% to 94.0%) using thin layer chromatography and broth culture method. The most promising cultures (AMC3) to decolorize Acid green Dye (94.6%) was re-coded as NSDSUAM for submitting at IMTECH, Chandigarh for sequencing. The 16SrRNA sequencing suggested that it can be a variant of Pseudomonas geniculata (99.85% identical similarity) with difference of 2 base pairs to reference strain Pseudomonas geniculata ATCC 19374(T). Thus present study proposed dye decolorizing efficiency of the isolated strain of Pseudomonas geniculata that was previously unnoticed. The sequence is deposited in NCBI GenBank with the accession number KP238100. Biomedical Informatics 2015-01-30 /pmc/articles/PMC4349931/ /pubmed/25780272 http://dx.doi.org/10.6026/97320630011001 Text en © 2015 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Kumar, Avnish Asthana, Monika Gupta, Poonam Yadav, Shweta Sharma, Deepti Singh, Km Neeraj Kumar, Sunil 16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil |
title | 16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil |
title_full | 16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil |
title_fullStr | 16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil |
title_full_unstemmed | 16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil |
title_short | 16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil |
title_sort | 16srrna sequencing of dye decolorizing bacteria isolated from soil |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4349931/ https://www.ncbi.nlm.nih.gov/pubmed/25780272 http://dx.doi.org/10.6026/97320630011001 |
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