Cargando…
ITIS, a bioinformatics tool for accurate identification of transposon insertion sites using next-generation sequencing data
BACKGROUND: Transposable elements constitute an important part of the genome and are essential in adaptive mechanisms. Transposition events associated with phenotypic changes occur naturally or are induced in insertional mutant populations. Transposon mutagenesis results in multiple random insertion...
Autores principales: | Jiang, Chuan, Chen, Chao, Huang, Ziyue, Liu, Renyi, Verdier, Jerome |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4351942/ https://www.ncbi.nlm.nih.gov/pubmed/25887332 http://dx.doi.org/10.1186/s12859-015-0507-2 |
Ejemplares similares
-
A benchmark of transposon insertion detection tools using real data
por: Vendrell-Mir, Pol, et al.
Publicado: (2019) -
Transposon insertion profiling by sequencing (TIPseq) for mapping LINE-1 insertions in the human genome
por: Steranka, Jared P., et al.
Publicado: (2019) -
Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery
por: Hormozdiari, Fereydoun, et al.
Publicado: (2010) -
Identification of piggyBac-mediated insertions in Plasmodium berghei by next generation sequencing
por: Cao, Yi, et al.
Publicado: (2013) -
Jitterbug: somatic and germline transposon insertion detection at single-nucleotide resolution
por: Hénaff, Elizabeth, et al.
Publicado: (2015)