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Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models

BACKGROUND: Emerging novel influenza outbreaks have increasingly been a threat to the public and a major concern of public health departments. Real-time data in seamless surveillance systems such as health insurance claims data for influenza-like illnesses (ILI) are ready for analysis, making it hig...

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Autores principales: Chan, Ta-Chien, Teng, Yung-Chu, Hwang, Jing-Shiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352259/
https://www.ncbi.nlm.nih.gov/pubmed/25886316
http://dx.doi.org/10.1186/s12889-015-1500-4
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author Chan, Ta-Chien
Teng, Yung-Chu
Hwang, Jing-Shiang
author_facet Chan, Ta-Chien
Teng, Yung-Chu
Hwang, Jing-Shiang
author_sort Chan, Ta-Chien
collection PubMed
description BACKGROUND: Emerging novel influenza outbreaks have increasingly been a threat to the public and a major concern of public health departments. Real-time data in seamless surveillance systems such as health insurance claims data for influenza-like illnesses (ILI) are ready for analysis, making it highly desirable to develop practical techniques to analyze such readymade data for outbreak detection so that the public can receive timely influenza epidemic warnings. This study proposes a simple and effective approach to analyze area-based health insurance claims data including outpatient and emergency department (ED) visits for early detection of any aberrations of ILI. METHODS: The health insurance claims data during 2004–2009 from a national health insurance research database were used for developing early detection methods. The proposed approach fitted the daily new ILI visits and monitored the Pearson residuals directly for aberration detection. First, negative binomial regression was used for both outpatient and ED visits to adjust for potentially influential factors such as holidays, weekends, seasons, temporal dependence and temperature. Second, if the Pearson residuals exceeded 1.96, aberration signals were issued. The empirical validation of the model was done in 2008 and 2009. In addition, we designed a simulation study to compare the time of outbreak detection, non-detection probability and false alarm rate between the proposed method and modified CUSUM. RESULTS: The model successfully detected the aberrations of 2009 pandemic (H1N1) influenza virus in northern, central and southern Taiwan. The proposed approach was more sensitive in identifying aberrations in ED visits than those in outpatient visits. Simulation studies demonstrated that the proposed approach could detect the aberrations earlier, and with lower non-detection probability and mean false alarm rate in detecting aberrations compared to modified CUSUM methods. CONCLUSIONS: The proposed simple approach was able to filter out temporal trends, adjust for temperature, and issue warning signals for the first wave of the influenza epidemic in a timely and accurate manner. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12889-015-1500-4) contains supplementary material, which is available to authorized users.
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spelling pubmed-43522592015-03-08 Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models Chan, Ta-Chien Teng, Yung-Chu Hwang, Jing-Shiang BMC Public Health Research Article BACKGROUND: Emerging novel influenza outbreaks have increasingly been a threat to the public and a major concern of public health departments. Real-time data in seamless surveillance systems such as health insurance claims data for influenza-like illnesses (ILI) are ready for analysis, making it highly desirable to develop practical techniques to analyze such readymade data for outbreak detection so that the public can receive timely influenza epidemic warnings. This study proposes a simple and effective approach to analyze area-based health insurance claims data including outpatient and emergency department (ED) visits for early detection of any aberrations of ILI. METHODS: The health insurance claims data during 2004–2009 from a national health insurance research database were used for developing early detection methods. The proposed approach fitted the daily new ILI visits and monitored the Pearson residuals directly for aberration detection. First, negative binomial regression was used for both outpatient and ED visits to adjust for potentially influential factors such as holidays, weekends, seasons, temporal dependence and temperature. Second, if the Pearson residuals exceeded 1.96, aberration signals were issued. The empirical validation of the model was done in 2008 and 2009. In addition, we designed a simulation study to compare the time of outbreak detection, non-detection probability and false alarm rate between the proposed method and modified CUSUM. RESULTS: The model successfully detected the aberrations of 2009 pandemic (H1N1) influenza virus in northern, central and southern Taiwan. The proposed approach was more sensitive in identifying aberrations in ED visits than those in outpatient visits. Simulation studies demonstrated that the proposed approach could detect the aberrations earlier, and with lower non-detection probability and mean false alarm rate in detecting aberrations compared to modified CUSUM methods. CONCLUSIONS: The proposed simple approach was able to filter out temporal trends, adjust for temperature, and issue warning signals for the first wave of the influenza epidemic in a timely and accurate manner. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12889-015-1500-4) contains supplementary material, which is available to authorized users. BioMed Central 2015-02-21 /pmc/articles/PMC4352259/ /pubmed/25886316 http://dx.doi.org/10.1186/s12889-015-1500-4 Text en © Chan et al.; licensee BioMed Central. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Chan, Ta-Chien
Teng, Yung-Chu
Hwang, Jing-Shiang
Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models
title Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models
title_full Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models
title_fullStr Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models
title_full_unstemmed Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models
title_short Detection of influenza-like illness aberrations by directly monitoring Pearson residuals of fitted negative binomial regression models
title_sort detection of influenza-like illness aberrations by directly monitoring pearson residuals of fitted negative binomial regression models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352259/
https://www.ncbi.nlm.nih.gov/pubmed/25886316
http://dx.doi.org/10.1186/s12889-015-1500-4
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