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Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci

In the present study, we presented the population genetic data and their forensic parameters of 21 non-CODIS autosomal STR loci in Chinese Guanzhong Han population. A total of 166 alleles were observed with corresponding allelic frequencies ranging from 0.0018 to 0.5564. No STR locus was observed to...

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Autores principales: Zhang, Yu-Dang, Tang, Xiao-Li, Meng, Hao-Tian, Wang, Hong-Dan, Jin, Rui, Yang, Chun-Hua, Yan, Jiang-Wei, Yang, Guang, Liu, Wen-Juan, Shen, Chun-Mei, Zhu, Bo-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352849/
https://www.ncbi.nlm.nih.gov/pubmed/25747708
http://dx.doi.org/10.1038/srep08872
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author Zhang, Yu-Dang
Tang, Xiao-Li
Meng, Hao-Tian
Wang, Hong-Dan
Jin, Rui
Yang, Chun-Hua
Yan, Jiang-Wei
Yang, Guang
Liu, Wen-Juan
Shen, Chun-Mei
Zhu, Bo-Feng
author_facet Zhang, Yu-Dang
Tang, Xiao-Li
Meng, Hao-Tian
Wang, Hong-Dan
Jin, Rui
Yang, Chun-Hua
Yan, Jiang-Wei
Yang, Guang
Liu, Wen-Juan
Shen, Chun-Mei
Zhu, Bo-Feng
author_sort Zhang, Yu-Dang
collection PubMed
description In the present study, we presented the population genetic data and their forensic parameters of 21 non-CODIS autosomal STR loci in Chinese Guanzhong Han population. A total of 166 alleles were observed with corresponding allelic frequencies ranging from 0.0018 to 0.5564. No STR locus was observed to deviate from the Hardy-Weinberg equilibrium and linkage disequilibriums after applying Bonferroni correction. The cumulative power of discrimination and probability of exclusion of all the 21 STR loci were 0.99999999999999999993814 and 0.999998184, respectively. The results of genetic distances, phylogenetic trees and principal component analysis revealed that the Guanzhong Han population had a closer relationship with Ningxia Han, Tujia and Bai groups than other populations tested. In summary, these 21 STR loci showed a high level of genetic polymorphisms for the Guanzhong Han population and could be used for forensic applications and the studies of population genetics.
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spelling pubmed-43528492015-03-17 Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci Zhang, Yu-Dang Tang, Xiao-Li Meng, Hao-Tian Wang, Hong-Dan Jin, Rui Yang, Chun-Hua Yan, Jiang-Wei Yang, Guang Liu, Wen-Juan Shen, Chun-Mei Zhu, Bo-Feng Sci Rep Article In the present study, we presented the population genetic data and their forensic parameters of 21 non-CODIS autosomal STR loci in Chinese Guanzhong Han population. A total of 166 alleles were observed with corresponding allelic frequencies ranging from 0.0018 to 0.5564. No STR locus was observed to deviate from the Hardy-Weinberg equilibrium and linkage disequilibriums after applying Bonferroni correction. The cumulative power of discrimination and probability of exclusion of all the 21 STR loci were 0.99999999999999999993814 and 0.999998184, respectively. The results of genetic distances, phylogenetic trees and principal component analysis revealed that the Guanzhong Han population had a closer relationship with Ningxia Han, Tujia and Bai groups than other populations tested. In summary, these 21 STR loci showed a high level of genetic polymorphisms for the Guanzhong Han population and could be used for forensic applications and the studies of population genetics. Nature Publishing Group 2015-03-09 /pmc/articles/PMC4352849/ /pubmed/25747708 http://dx.doi.org/10.1038/srep08872 Text en Copyright © 2015, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Zhang, Yu-Dang
Tang, Xiao-Li
Meng, Hao-Tian
Wang, Hong-Dan
Jin, Rui
Yang, Chun-Hua
Yan, Jiang-Wei
Yang, Guang
Liu, Wen-Juan
Shen, Chun-Mei
Zhu, Bo-Feng
Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci
title Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci
title_full Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci
title_fullStr Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci
title_full_unstemmed Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci
title_short Genetic Variability and Phylogenetic Analysis of Han Population from Guanzhong Region of China based on 21 non-CODIS STR Loci
title_sort genetic variability and phylogenetic analysis of han population from guanzhong region of china based on 21 non-codis str loci
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352849/
https://www.ncbi.nlm.nih.gov/pubmed/25747708
http://dx.doi.org/10.1038/srep08872
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