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Investigating Different Duplication Pattern of Essential Genes in Mouse and Human

Gene duplication is one of the major driving forces shaping genome and organism evolution and thought to be itself regulated by some intrinsic properties of the gene. Comparing the essential genes among mouse and human, we observed that the essential genes avoid duplication in mouse while prefer to...

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Autores principales: Acharya, Debarun, Mukherjee, Dola, Podder, Soumita, Ghosh, Tapash C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4353620/
https://www.ncbi.nlm.nih.gov/pubmed/25751152
http://dx.doi.org/10.1371/journal.pone.0120784
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author Acharya, Debarun
Mukherjee, Dola
Podder, Soumita
Ghosh, Tapash C.
author_facet Acharya, Debarun
Mukherjee, Dola
Podder, Soumita
Ghosh, Tapash C.
author_sort Acharya, Debarun
collection PubMed
description Gene duplication is one of the major driving forces shaping genome and organism evolution and thought to be itself regulated by some intrinsic properties of the gene. Comparing the essential genes among mouse and human, we observed that the essential genes avoid duplication in mouse while prefer to remain duplicated in humans. In this study, we wanted to explore the reasons behind such differences in gene essentiality by cross-species comparison of human and mouse. Moreover, we examined essential genes that are duplicated in humans are functionally more redundant than that in mouse. The proportion of paralog pseudogenization of essential genes is higher in mouse than that of humans. These duplicates of essential genes are under stringent dosage regulation in human than in mouse. We also observed slower evolutionary rate in the paralogs of human essential genes than the mouse counterpart. Together, these results clearly indicate that human essential genes are retained as duplicates to serve as backed up copies that may shield themselves from harmful mutations.
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spelling pubmed-43536202015-03-17 Investigating Different Duplication Pattern of Essential Genes in Mouse and Human Acharya, Debarun Mukherjee, Dola Podder, Soumita Ghosh, Tapash C. PLoS One Research Article Gene duplication is one of the major driving forces shaping genome and organism evolution and thought to be itself regulated by some intrinsic properties of the gene. Comparing the essential genes among mouse and human, we observed that the essential genes avoid duplication in mouse while prefer to remain duplicated in humans. In this study, we wanted to explore the reasons behind such differences in gene essentiality by cross-species comparison of human and mouse. Moreover, we examined essential genes that are duplicated in humans are functionally more redundant than that in mouse. The proportion of paralog pseudogenization of essential genes is higher in mouse than that of humans. These duplicates of essential genes are under stringent dosage regulation in human than in mouse. We also observed slower evolutionary rate in the paralogs of human essential genes than the mouse counterpart. Together, these results clearly indicate that human essential genes are retained as duplicates to serve as backed up copies that may shield themselves from harmful mutations. Public Library of Science 2015-03-09 /pmc/articles/PMC4353620/ /pubmed/25751152 http://dx.doi.org/10.1371/journal.pone.0120784 Text en © 2015 Acharya et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Acharya, Debarun
Mukherjee, Dola
Podder, Soumita
Ghosh, Tapash C.
Investigating Different Duplication Pattern of Essential Genes in Mouse and Human
title Investigating Different Duplication Pattern of Essential Genes in Mouse and Human
title_full Investigating Different Duplication Pattern of Essential Genes in Mouse and Human
title_fullStr Investigating Different Duplication Pattern of Essential Genes in Mouse and Human
title_full_unstemmed Investigating Different Duplication Pattern of Essential Genes in Mouse and Human
title_short Investigating Different Duplication Pattern of Essential Genes in Mouse and Human
title_sort investigating different duplication pattern of essential genes in mouse and human
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4353620/
https://www.ncbi.nlm.nih.gov/pubmed/25751152
http://dx.doi.org/10.1371/journal.pone.0120784
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