Cargando…

Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa

EYS mutations demonstrate great genotypic and phenotypic varieties, and are one of the major causes for patients with autosomal recessive retinitis pigmentosa (ARRP). Here, we aim to determine the genetic lesions with phenotypic correlations in two Chinese families with ARRP. Medical histories and o...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Xue, Liu, Xiaoxing, Sheng, Xunlun, Gao, Xiang, Zhang, Xiumei, Li, Zili, Li, Huiping, Liu, Yani, Rong, Weining, Zhao, Kanxing, Zhao, Chen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4354143/
https://www.ncbi.nlm.nih.gov/pubmed/25753737
http://dx.doi.org/10.1038/srep08927
_version_ 1782360713038135296
author Chen, Xue
Liu, Xiaoxing
Sheng, Xunlun
Gao, Xiang
Zhang, Xiumei
Li, Zili
Li, Huiping
Liu, Yani
Rong, Weining
Zhao, Kanxing
Zhao, Chen
author_facet Chen, Xue
Liu, Xiaoxing
Sheng, Xunlun
Gao, Xiang
Zhang, Xiumei
Li, Zili
Li, Huiping
Liu, Yani
Rong, Weining
Zhao, Kanxing
Zhao, Chen
author_sort Chen, Xue
collection PubMed
description EYS mutations demonstrate great genotypic and phenotypic varieties, and are one of the major causes for patients with autosomal recessive retinitis pigmentosa (ARRP). Here, we aim to determine the genetic lesions with phenotypic correlations in two Chinese families with ARRP. Medical histories and ophthalmic documentations were obtained from all participants from the two pedigrees. Targeted next-generation sequencing (NGS) on 189 genes was performed to screen for RP causative mutations in the two families. Two biallelic mutations in EYS, p.[R164*];[C2139Y] and p.[W2640*];[F2954S], were identified in the two families, respectively. EYS p.R164* and p.F2954S are novel alleles associated with RP, while p.C2139Y and p.W2640* are known mutations. Crystal structure modeling on the protein eyes shut homolog encoded by the EYS gene revealed abnormal hydrogen bonds generated by p.C2139Y and p.F2954S, which would likely affect the solubility and cause significant structural changes of the two mutated proteins. In conclusion, our study expands the genotypic spectrums for EYS mutations, and may provide novel insights into the relevant pathogenesis for RP. We also demonstrate targeted NGS approach as a valuable tool for genetic diagnosis.
format Online
Article
Text
id pubmed-4354143
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-43541432015-03-17 Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa Chen, Xue Liu, Xiaoxing Sheng, Xunlun Gao, Xiang Zhang, Xiumei Li, Zili Li, Huiping Liu, Yani Rong, Weining Zhao, Kanxing Zhao, Chen Sci Rep Article EYS mutations demonstrate great genotypic and phenotypic varieties, and are one of the major causes for patients with autosomal recessive retinitis pigmentosa (ARRP). Here, we aim to determine the genetic lesions with phenotypic correlations in two Chinese families with ARRP. Medical histories and ophthalmic documentations were obtained from all participants from the two pedigrees. Targeted next-generation sequencing (NGS) on 189 genes was performed to screen for RP causative mutations in the two families. Two biallelic mutations in EYS, p.[R164*];[C2139Y] and p.[W2640*];[F2954S], were identified in the two families, respectively. EYS p.R164* and p.F2954S are novel alleles associated with RP, while p.C2139Y and p.W2640* are known mutations. Crystal structure modeling on the protein eyes shut homolog encoded by the EYS gene revealed abnormal hydrogen bonds generated by p.C2139Y and p.F2954S, which would likely affect the solubility and cause significant structural changes of the two mutated proteins. In conclusion, our study expands the genotypic spectrums for EYS mutations, and may provide novel insights into the relevant pathogenesis for RP. We also demonstrate targeted NGS approach as a valuable tool for genetic diagnosis. Nature Publishing Group 2015-03-10 /pmc/articles/PMC4354143/ /pubmed/25753737 http://dx.doi.org/10.1038/srep08927 Text en Copyright © 2015, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
spellingShingle Article
Chen, Xue
Liu, Xiaoxing
Sheng, Xunlun
Gao, Xiang
Zhang, Xiumei
Li, Zili
Li, Huiping
Liu, Yani
Rong, Weining
Zhao, Kanxing
Zhao, Chen
Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa
title Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa
title_full Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa
title_fullStr Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa
title_full_unstemmed Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa
title_short Targeted Next-generation Sequencing Reveals Novel EYS Mutations in Chinese Families with Autosomal Recessive Retinitis Pigmentosa
title_sort targeted next-generation sequencing reveals novel eys mutations in chinese families with autosomal recessive retinitis pigmentosa
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4354143/
https://www.ncbi.nlm.nih.gov/pubmed/25753737
http://dx.doi.org/10.1038/srep08927
work_keys_str_mv AT chenxue targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT liuxiaoxing targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT shengxunlun targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT gaoxiang targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT zhangxiumei targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT lizili targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT lihuiping targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT liuyani targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT rongweining targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT zhaokanxing targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa
AT zhaochen targetednextgenerationsequencingrevealsnoveleysmutationsinchinesefamilieswithautosomalrecessiveretinitispigmentosa