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Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)
PREMISE OF THE STUDY: To facilitate population genetic analyses, microsatellite markers were developed for pokeweed (Phytolacca americana), a large, weedy, perennial herb native to eastern North America that is emerging as a significant invasive species in China. METHODS AND RESULTS: We mined 1,100,...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356323/ https://www.ncbi.nlm.nih.gov/pubmed/25798346 http://dx.doi.org/10.3732/apps.1500002 |
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author | Bentley, Kerin E. Berryman, Kaelyn R. Hopper, McGee Hoffberg, Sandra L. Myhre, Karin E. Iwao, Keisuke Lee, Jared B. Glenn, Travis C. Mauricio, Rodney |
author_facet | Bentley, Kerin E. Berryman, Kaelyn R. Hopper, McGee Hoffberg, Sandra L. Myhre, Karin E. Iwao, Keisuke Lee, Jared B. Glenn, Travis C. Mauricio, Rodney |
author_sort | Bentley, Kerin E. |
collection | PubMed |
description | PREMISE OF THE STUDY: To facilitate population genetic analyses, microsatellite markers were developed for pokeweed (Phytolacca americana), a large, weedy, perennial herb native to eastern North America that is emerging as a significant invasive species in China. METHODS AND RESULTS: We mined 1,100,538 Illumina MiSeq reads from genomic DNA for microsatellites and identified 58 primer pairs. We screened these primers for polymorphism in two native and two invasive populations. We identified 11 loci that amplified consistently. The number of alleles per locus ranged from two to six, and observed heterozygosity ranged from 0.00 to 1.00. All loci were largely monomorphic within populations but different among populations. The primers were of very limited use in the congener P. acinosa. CONCLUSIONS: These loci will provide a valuable resource to study the population genetics and invasion history of P. americana. |
format | Online Article Text |
id | pubmed-4356323 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-43563232015-03-20 Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) Bentley, Kerin E. Berryman, Kaelyn R. Hopper, McGee Hoffberg, Sandra L. Myhre, Karin E. Iwao, Keisuke Lee, Jared B. Glenn, Travis C. Mauricio, Rodney Appl Plant Sci Primer Note PREMISE OF THE STUDY: To facilitate population genetic analyses, microsatellite markers were developed for pokeweed (Phytolacca americana), a large, weedy, perennial herb native to eastern North America that is emerging as a significant invasive species in China. METHODS AND RESULTS: We mined 1,100,538 Illumina MiSeq reads from genomic DNA for microsatellites and identified 58 primer pairs. We screened these primers for polymorphism in two native and two invasive populations. We identified 11 loci that amplified consistently. The number of alleles per locus ranged from two to six, and observed heterozygosity ranged from 0.00 to 1.00. All loci were largely monomorphic within populations but different among populations. The primers were of very limited use in the congener P. acinosa. CONCLUSIONS: These loci will provide a valuable resource to study the population genetics and invasion history of P. americana. Botanical Society of America 2015-03-09 /pmc/articles/PMC4356323/ /pubmed/25798346 http://dx.doi.org/10.3732/apps.1500002 Text en © 2015 Bentley et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Bentley, Kerin E. Berryman, Kaelyn R. Hopper, McGee Hoffberg, Sandra L. Myhre, Karin E. Iwao, Keisuke Lee, Jared B. Glenn, Travis C. Mauricio, Rodney Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) |
title | Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) |
title_full | Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) |
title_fullStr | Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) |
title_full_unstemmed | Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) |
title_short | Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) |
title_sort | eleven microsatellites in an emerging invader, phytolacca americana (phytolaccaceae), from its native and introduced ranges(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356323/ https://www.ncbi.nlm.nih.gov/pubmed/25798346 http://dx.doi.org/10.3732/apps.1500002 |
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