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Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)

PREMISE OF THE STUDY: To facilitate population genetic analyses, microsatellite markers were developed for pokeweed (Phytolacca americana), a large, weedy, perennial herb native to eastern North America that is emerging as a significant invasive species in China. METHODS AND RESULTS: We mined 1,100,...

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Autores principales: Bentley, Kerin E., Berryman, Kaelyn R., Hopper, McGee, Hoffberg, Sandra L., Myhre, Karin E., Iwao, Keisuke, Lee, Jared B., Glenn, Travis C., Mauricio, Rodney
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356323/
https://www.ncbi.nlm.nih.gov/pubmed/25798346
http://dx.doi.org/10.3732/apps.1500002
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author Bentley, Kerin E.
Berryman, Kaelyn R.
Hopper, McGee
Hoffberg, Sandra L.
Myhre, Karin E.
Iwao, Keisuke
Lee, Jared B.
Glenn, Travis C.
Mauricio, Rodney
author_facet Bentley, Kerin E.
Berryman, Kaelyn R.
Hopper, McGee
Hoffberg, Sandra L.
Myhre, Karin E.
Iwao, Keisuke
Lee, Jared B.
Glenn, Travis C.
Mauricio, Rodney
author_sort Bentley, Kerin E.
collection PubMed
description PREMISE OF THE STUDY: To facilitate population genetic analyses, microsatellite markers were developed for pokeweed (Phytolacca americana), a large, weedy, perennial herb native to eastern North America that is emerging as a significant invasive species in China. METHODS AND RESULTS: We mined 1,100,538 Illumina MiSeq reads from genomic DNA for microsatellites and identified 58 primer pairs. We screened these primers for polymorphism in two native and two invasive populations. We identified 11 loci that amplified consistently. The number of alleles per locus ranged from two to six, and observed heterozygosity ranged from 0.00 to 1.00. All loci were largely monomorphic within populations but different among populations. The primers were of very limited use in the congener P. acinosa. CONCLUSIONS: These loci will provide a valuable resource to study the population genetics and invasion history of P. americana.
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spelling pubmed-43563232015-03-20 Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1) Bentley, Kerin E. Berryman, Kaelyn R. Hopper, McGee Hoffberg, Sandra L. Myhre, Karin E. Iwao, Keisuke Lee, Jared B. Glenn, Travis C. Mauricio, Rodney Appl Plant Sci Primer Note PREMISE OF THE STUDY: To facilitate population genetic analyses, microsatellite markers were developed for pokeweed (Phytolacca americana), a large, weedy, perennial herb native to eastern North America that is emerging as a significant invasive species in China. METHODS AND RESULTS: We mined 1,100,538 Illumina MiSeq reads from genomic DNA for microsatellites and identified 58 primer pairs. We screened these primers for polymorphism in two native and two invasive populations. We identified 11 loci that amplified consistently. The number of alleles per locus ranged from two to six, and observed heterozygosity ranged from 0.00 to 1.00. All loci were largely monomorphic within populations but different among populations. The primers were of very limited use in the congener P. acinosa. CONCLUSIONS: These loci will provide a valuable resource to study the population genetics and invasion history of P. americana. Botanical Society of America 2015-03-09 /pmc/articles/PMC4356323/ /pubmed/25798346 http://dx.doi.org/10.3732/apps.1500002 Text en © 2015 Bentley et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Bentley, Kerin E.
Berryman, Kaelyn R.
Hopper, McGee
Hoffberg, Sandra L.
Myhre, Karin E.
Iwao, Keisuke
Lee, Jared B.
Glenn, Travis C.
Mauricio, Rodney
Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)
title Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)
title_full Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)
title_fullStr Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)
title_full_unstemmed Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)
title_short Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges(1)
title_sort eleven microsatellites in an emerging invader, phytolacca americana (phytolaccaceae), from its native and introduced ranges(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356323/
https://www.ncbi.nlm.nih.gov/pubmed/25798346
http://dx.doi.org/10.3732/apps.1500002
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