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Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice
The Arabidopsis ovate family proteins (AtOFPs) have been shown to function as transcriptional repressors and regulate multiple aspects of plant growth and development. There are 31 genes that encode the full-length OVATE-domain containing proteins in the rice genome. In this study, the gene structur...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356581/ https://www.ncbi.nlm.nih.gov/pubmed/25760462 http://dx.doi.org/10.1371/journal.pone.0118966 |
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author | Yu, Hui Jiang, Wenzhu Liu, Qing Zhang, Hui Piao, Mingxin Chen, Zhengdao Bian, Mingdi |
author_facet | Yu, Hui Jiang, Wenzhu Liu, Qing Zhang, Hui Piao, Mingxin Chen, Zhengdao Bian, Mingdi |
author_sort | Yu, Hui |
collection | PubMed |
description | The Arabidopsis ovate family proteins (AtOFPs) have been shown to function as transcriptional repressors and regulate multiple aspects of plant growth and development. There are 31 genes that encode the full-length OVATE-domain containing proteins in the rice genome. In this study, the gene structure analysis revealed that OsOFPs are intron poor. Phylogenetic analysis suggested that OVATE proteins from rice, Arabidopsis and tomato can be divided into 4 groups (I–IV). Real-time quantitative polymerase chain reaction (RT-qPCR) analysis identified OsOFPs with different tissue-specific expression patterns at all stages of development in the rice plant. Interestingly, nearly half of the total number of OsOFP family was more highly expressed during the seed developmental stage. In addition, seed developmental cis-elements were found in the promoter region of the OsOFPs. Subcellular localization analysis revealed that YFP-OsOFP fusion proteins predominantly localized in the nucleus. Our results suggest that OsOFPs may act as regulatory proteins and play pivotal roles in the growth and development of rice. |
format | Online Article Text |
id | pubmed-4356581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43565812015-03-17 Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice Yu, Hui Jiang, Wenzhu Liu, Qing Zhang, Hui Piao, Mingxin Chen, Zhengdao Bian, Mingdi PLoS One Research Article The Arabidopsis ovate family proteins (AtOFPs) have been shown to function as transcriptional repressors and regulate multiple aspects of plant growth and development. There are 31 genes that encode the full-length OVATE-domain containing proteins in the rice genome. In this study, the gene structure analysis revealed that OsOFPs are intron poor. Phylogenetic analysis suggested that OVATE proteins from rice, Arabidopsis and tomato can be divided into 4 groups (I–IV). Real-time quantitative polymerase chain reaction (RT-qPCR) analysis identified OsOFPs with different tissue-specific expression patterns at all stages of development in the rice plant. Interestingly, nearly half of the total number of OsOFP family was more highly expressed during the seed developmental stage. In addition, seed developmental cis-elements were found in the promoter region of the OsOFPs. Subcellular localization analysis revealed that YFP-OsOFP fusion proteins predominantly localized in the nucleus. Our results suggest that OsOFPs may act as regulatory proteins and play pivotal roles in the growth and development of rice. Public Library of Science 2015-03-11 /pmc/articles/PMC4356581/ /pubmed/25760462 http://dx.doi.org/10.1371/journal.pone.0118966 Text en © 2015 Yu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Yu, Hui Jiang, Wenzhu Liu, Qing Zhang, Hui Piao, Mingxin Chen, Zhengdao Bian, Mingdi Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice |
title | Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice |
title_full | Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice |
title_fullStr | Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice |
title_full_unstemmed | Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice |
title_short | Expression Pattern and Subcellular Localization of the Ovate Protein Family in Rice |
title_sort | expression pattern and subcellular localization of the ovate protein family in rice |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356581/ https://www.ncbi.nlm.nih.gov/pubmed/25760462 http://dx.doi.org/10.1371/journal.pone.0118966 |
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