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Bayesian inference for low-rank Ising networks

Estimating the structure of Ising networks is a notoriously difficult problem. We demonstrate that using a latent variable representation of the Ising network, we can employ a full-data-information approach to uncover the network structure. Thereby, only ignoring information encoded in the prior dis...

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Detalles Bibliográficos
Autores principales: Marsman, Maarten, Maris, Gunter, Bechger, Timo, Glas, Cees
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356966/
https://www.ncbi.nlm.nih.gov/pubmed/25761415
http://dx.doi.org/10.1038/srep09050
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author Marsman, Maarten
Maris, Gunter
Bechger, Timo
Glas, Cees
author_facet Marsman, Maarten
Maris, Gunter
Bechger, Timo
Glas, Cees
author_sort Marsman, Maarten
collection PubMed
description Estimating the structure of Ising networks is a notoriously difficult problem. We demonstrate that using a latent variable representation of the Ising network, we can employ a full-data-information approach to uncover the network structure. Thereby, only ignoring information encoded in the prior distribution (of the latent variables). The full-data-information approach avoids having to compute the partition function and is thus computationally feasible, even for networks with many nodes. We illustrate the full-data-information approach with the estimation of dense networks.
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spelling pubmed-43569662015-03-17 Bayesian inference for low-rank Ising networks Marsman, Maarten Maris, Gunter Bechger, Timo Glas, Cees Sci Rep Article Estimating the structure of Ising networks is a notoriously difficult problem. We demonstrate that using a latent variable representation of the Ising network, we can employ a full-data-information approach to uncover the network structure. Thereby, only ignoring information encoded in the prior distribution (of the latent variables). The full-data-information approach avoids having to compute the partition function and is thus computationally feasible, even for networks with many nodes. We illustrate the full-data-information approach with the estimation of dense networks. Nature Publishing Group 2015-03-12 /pmc/articles/PMC4356966/ /pubmed/25761415 http://dx.doi.org/10.1038/srep09050 Text en Copyright © 2015, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Marsman, Maarten
Maris, Gunter
Bechger, Timo
Glas, Cees
Bayesian inference for low-rank Ising networks
title Bayesian inference for low-rank Ising networks
title_full Bayesian inference for low-rank Ising networks
title_fullStr Bayesian inference for low-rank Ising networks
title_full_unstemmed Bayesian inference for low-rank Ising networks
title_short Bayesian inference for low-rank Ising networks
title_sort bayesian inference for low-rank ising networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356966/
https://www.ncbi.nlm.nih.gov/pubmed/25761415
http://dx.doi.org/10.1038/srep09050
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