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Calculating second derivatives of population growth rates for ecology and evolution
1. Second derivatives of the population growth rate measure the curvature of its response to demographic, physiological or environmental parameters. The second derivatives quantify the response of sensitivity results to perturbations, provide a classification of types of selection and provide one wa...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Ltd
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4358155/ https://www.ncbi.nlm.nih.gov/pubmed/25793101 http://dx.doi.org/10.1111/2041-210X.12179 |
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author | Shyu, Esther Caswell, Hal |
author_facet | Shyu, Esther Caswell, Hal |
author_sort | Shyu, Esther |
collection | PubMed |
description | 1. Second derivatives of the population growth rate measure the curvature of its response to demographic, physiological or environmental parameters. The second derivatives quantify the response of sensitivity results to perturbations, provide a classification of types of selection and provide one way to calculate sensitivities of the stochastic growth rate. 2. Using matrix calculus, we derive the second derivatives of three population growth rate measures: the discrete-time growth rate λ, the continuous-time growth rate r = log λ and the net reproductive rate R(0), which measures per-generation growth. 3. We present a suite of formulae for the second derivatives of each growth rate and show how to compute these derivatives with respect to projection matrix entries and to lower-level parameters affecting those matrix entries. 4. We also illustrate several ecological and evolutionary applications for these second derivative calculations with a case study for the tropical herb Calathea ovandensis. |
format | Online Article Text |
id | pubmed-4358155 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Blackwell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-43581552015-03-17 Calculating second derivatives of population growth rates for ecology and evolution Shyu, Esther Caswell, Hal Methods Ecol Evol Movement and Modelling 1. Second derivatives of the population growth rate measure the curvature of its response to demographic, physiological or environmental parameters. The second derivatives quantify the response of sensitivity results to perturbations, provide a classification of types of selection and provide one way to calculate sensitivities of the stochastic growth rate. 2. Using matrix calculus, we derive the second derivatives of three population growth rate measures: the discrete-time growth rate λ, the continuous-time growth rate r = log λ and the net reproductive rate R(0), which measures per-generation growth. 3. We present a suite of formulae for the second derivatives of each growth rate and show how to compute these derivatives with respect to projection matrix entries and to lower-level parameters affecting those matrix entries. 4. We also illustrate several ecological and evolutionary applications for these second derivative calculations with a case study for the tropical herb Calathea ovandensis. Blackwell Publishing Ltd 2014-05 2014-05-19 /pmc/articles/PMC4358155/ /pubmed/25793101 http://dx.doi.org/10.1111/2041-210X.12179 Text en © 2014 The Authors. Methods in Ecology and Evolution published by John Wiley & Sons Ltd on behalf of British Ecological Society. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Movement and Modelling Shyu, Esther Caswell, Hal Calculating second derivatives of population growth rates for ecology and evolution |
title | Calculating second derivatives of population growth rates for ecology and evolution |
title_full | Calculating second derivatives of population growth rates for ecology and evolution |
title_fullStr | Calculating second derivatives of population growth rates for ecology and evolution |
title_full_unstemmed | Calculating second derivatives of population growth rates for ecology and evolution |
title_short | Calculating second derivatives of population growth rates for ecology and evolution |
title_sort | calculating second derivatives of population growth rates for ecology and evolution |
topic | Movement and Modelling |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4358155/ https://www.ncbi.nlm.nih.gov/pubmed/25793101 http://dx.doi.org/10.1111/2041-210X.12179 |
work_keys_str_mv | AT shyuesther calculatingsecondderivativesofpopulationgrowthratesforecologyandevolution AT caswellhal calculatingsecondderivativesofpopulationgrowthratesforecologyandevolution |