Cargando…
Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
Fourteen Ganoderma lucidum strains from different geographic regions were identified using ITS region sequencing. Based on the sequences obtained, the genomic relationship between the analyzed strains was determined. All G. lucidum strains were also genetically characterized using the AFLP technique...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4359883/ https://www.ncbi.nlm.nih.gov/pubmed/25815332 http://dx.doi.org/10.1155/2015/726149 |
_version_ | 1782361488701259776 |
---|---|
author | Pawlik, Anna Janusz, Grzegorz Dębska, Iwona Siwulski, Marek Frąc, Magdalena Rogalski, Jerzy |
author_facet | Pawlik, Anna Janusz, Grzegorz Dębska, Iwona Siwulski, Marek Frąc, Magdalena Rogalski, Jerzy |
author_sort | Pawlik, Anna |
collection | PubMed |
description | Fourteen Ganoderma lucidum strains from different geographic regions were identified using ITS region sequencing. Based on the sequences obtained, the genomic relationship between the analyzed strains was determined. All G. lucidum strains were also genetically characterized using the AFLP technique. G. lucidum strains included in the analysis displayed an AFLP profile similarity level in the range from 9.6 to 33.9%. Biolog FF MicroPlates were applied to obtain data on utilization of 95 carbon sources and mitochondrial activity. The analysis allowed comparison of functional diversity of the fungal strains. The substrate utilization profiles for the isolates tested revealed a broad variability within the analyzed G. lucidum species and proved to be a good profiling technology for studying the diversity in fungi. Significant differences have been demonstrated in substrate richness values. Interestingly, the analysis of growth and biomass production also differentiated the strains based on the growth rate on the agar and sawdust substrate. In general, the mycelial growth on the sawdust substrate was more balanced and the fastest fungal growth was observed for GRE3 and FCL192. |
format | Online Article Text |
id | pubmed-4359883 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-43598832015-03-26 Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum Pawlik, Anna Janusz, Grzegorz Dębska, Iwona Siwulski, Marek Frąc, Magdalena Rogalski, Jerzy Biomed Res Int Research Article Fourteen Ganoderma lucidum strains from different geographic regions were identified using ITS region sequencing. Based on the sequences obtained, the genomic relationship between the analyzed strains was determined. All G. lucidum strains were also genetically characterized using the AFLP technique. G. lucidum strains included in the analysis displayed an AFLP profile similarity level in the range from 9.6 to 33.9%. Biolog FF MicroPlates were applied to obtain data on utilization of 95 carbon sources and mitochondrial activity. The analysis allowed comparison of functional diversity of the fungal strains. The substrate utilization profiles for the isolates tested revealed a broad variability within the analyzed G. lucidum species and proved to be a good profiling technology for studying the diversity in fungi. Significant differences have been demonstrated in substrate richness values. Interestingly, the analysis of growth and biomass production also differentiated the strains based on the growth rate on the agar and sawdust substrate. In general, the mycelial growth on the sawdust substrate was more balanced and the fastest fungal growth was observed for GRE3 and FCL192. Hindawi Publishing Corporation 2015 2015-03-01 /pmc/articles/PMC4359883/ /pubmed/25815332 http://dx.doi.org/10.1155/2015/726149 Text en Copyright © 2015 Anna Pawlik et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Pawlik, Anna Janusz, Grzegorz Dębska, Iwona Siwulski, Marek Frąc, Magdalena Rogalski, Jerzy Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum |
title | Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
|
title_full | Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
|
title_fullStr | Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
|
title_full_unstemmed | Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
|
title_short | Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
|
title_sort | genetic and metabolic intraspecific biodiversity of ganoderma lucidum |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4359883/ https://www.ncbi.nlm.nih.gov/pubmed/25815332 http://dx.doi.org/10.1155/2015/726149 |
work_keys_str_mv | AT pawlikanna geneticandmetabolicintraspecificbiodiversityofganodermalucidum AT januszgrzegorz geneticandmetabolicintraspecificbiodiversityofganodermalucidum AT debskaiwona geneticandmetabolicintraspecificbiodiversityofganodermalucidum AT siwulskimarek geneticandmetabolicintraspecificbiodiversityofganodermalucidum AT fracmagdalena geneticandmetabolicintraspecificbiodiversityofganodermalucidum AT rogalskijerzy geneticandmetabolicintraspecificbiodiversityofganodermalucidum |