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Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum

Fourteen Ganoderma lucidum strains from different geographic regions were identified using ITS region sequencing. Based on the sequences obtained, the genomic relationship between the analyzed strains was determined. All G. lucidum strains were also genetically characterized using the AFLP technique...

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Autores principales: Pawlik, Anna, Janusz, Grzegorz, Dębska, Iwona, Siwulski, Marek, Frąc, Magdalena, Rogalski, Jerzy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4359883/
https://www.ncbi.nlm.nih.gov/pubmed/25815332
http://dx.doi.org/10.1155/2015/726149
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author Pawlik, Anna
Janusz, Grzegorz
Dębska, Iwona
Siwulski, Marek
Frąc, Magdalena
Rogalski, Jerzy
author_facet Pawlik, Anna
Janusz, Grzegorz
Dębska, Iwona
Siwulski, Marek
Frąc, Magdalena
Rogalski, Jerzy
author_sort Pawlik, Anna
collection PubMed
description Fourteen Ganoderma lucidum strains from different geographic regions were identified using ITS region sequencing. Based on the sequences obtained, the genomic relationship between the analyzed strains was determined. All G. lucidum strains were also genetically characterized using the AFLP technique. G. lucidum strains included in the analysis displayed an AFLP profile similarity level in the range from 9.6 to 33.9%. Biolog FF MicroPlates were applied to obtain data on utilization of 95 carbon sources and mitochondrial activity. The analysis allowed comparison of functional diversity of the fungal strains. The substrate utilization profiles for the isolates tested revealed a broad variability within the analyzed G. lucidum species and proved to be a good profiling technology for studying the diversity in fungi. Significant differences have been demonstrated in substrate richness values. Interestingly, the analysis of growth and biomass production also differentiated the strains based on the growth rate on the agar and sawdust substrate. In general, the mycelial growth on the sawdust substrate was more balanced and the fastest fungal growth was observed for GRE3 and FCL192.
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spelling pubmed-43598832015-03-26 Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum Pawlik, Anna Janusz, Grzegorz Dębska, Iwona Siwulski, Marek Frąc, Magdalena Rogalski, Jerzy Biomed Res Int Research Article Fourteen Ganoderma lucidum strains from different geographic regions were identified using ITS region sequencing. Based on the sequences obtained, the genomic relationship between the analyzed strains was determined. All G. lucidum strains were also genetically characterized using the AFLP technique. G. lucidum strains included in the analysis displayed an AFLP profile similarity level in the range from 9.6 to 33.9%. Biolog FF MicroPlates were applied to obtain data on utilization of 95 carbon sources and mitochondrial activity. The analysis allowed comparison of functional diversity of the fungal strains. The substrate utilization profiles for the isolates tested revealed a broad variability within the analyzed G. lucidum species and proved to be a good profiling technology for studying the diversity in fungi. Significant differences have been demonstrated in substrate richness values. Interestingly, the analysis of growth and biomass production also differentiated the strains based on the growth rate on the agar and sawdust substrate. In general, the mycelial growth on the sawdust substrate was more balanced and the fastest fungal growth was observed for GRE3 and FCL192. Hindawi Publishing Corporation 2015 2015-03-01 /pmc/articles/PMC4359883/ /pubmed/25815332 http://dx.doi.org/10.1155/2015/726149 Text en Copyright © 2015 Anna Pawlik et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Pawlik, Anna
Janusz, Grzegorz
Dębska, Iwona
Siwulski, Marek
Frąc, Magdalena
Rogalski, Jerzy
Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
title Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
title_full Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
title_fullStr Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
title_full_unstemmed Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
title_short Genetic and Metabolic Intraspecific Biodiversity of Ganoderma lucidum
title_sort genetic and metabolic intraspecific biodiversity of ganoderma lucidum
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4359883/
https://www.ncbi.nlm.nih.gov/pubmed/25815332
http://dx.doi.org/10.1155/2015/726149
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