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A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases

We applied and optimized the sparse representation (SR) approaches in the computer-aided diagnosis (CAD) to classify normal tissues and five kinds of diffuse lung disease (DLD) patterns: consolidation, ground-glass opacity, honeycombing, emphysema, and nodule. By using the K-SVD which is based on th...

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Autores principales: Zhao, Wei, Xu, Rui, Hirano, Yasushi, Tachibana, Rie, Kido, Shoji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4363677/
https://www.ncbi.nlm.nih.gov/pubmed/25821509
http://dx.doi.org/10.1155/2015/567932
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author Zhao, Wei
Xu, Rui
Hirano, Yasushi
Tachibana, Rie
Kido, Shoji
author_facet Zhao, Wei
Xu, Rui
Hirano, Yasushi
Tachibana, Rie
Kido, Shoji
author_sort Zhao, Wei
collection PubMed
description We applied and optimized the sparse representation (SR) approaches in the computer-aided diagnosis (CAD) to classify normal tissues and five kinds of diffuse lung disease (DLD) patterns: consolidation, ground-glass opacity, honeycombing, emphysema, and nodule. By using the K-SVD which is based on the singular value decomposition (SVD) and orthogonal matching pursuit (OMP), it can achieve a satisfied recognition rate, but too much time was spent in the experiment. To reduce the runtime of the method, the K-Means algorithm was substituted for the K-SVD, and the OMP was simplified by searching the desired atoms at one time (OMP(1)). We proposed three SR based methods for evaluation: SR1 (K-SVD+OMP), SR2 (K-Means+OMP), and SR3 (K-Means+OMP(1)). 1161 volumes of interest (VOIs) were used to optimize the parameters and train each method, and 1049 VOIs were adopted to evaluate the performances of the methods. The SR based methods were powerful to recognize the DLD patterns (SR1: 96.1%, SR2: 95.6%, SR3: 96.4%) and significantly better than the baseline methods. Furthermore, when the K-Means and OMP(1) were applied, the runtime of the SR based methods can be reduced by 98.2% and 55.2%, respectively. Therefore, we thought that the method using the K-Means and OMP(1) (SR3) was efficient for the CAD of the DLDs.
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spelling pubmed-43636772015-03-29 A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases Zhao, Wei Xu, Rui Hirano, Yasushi Tachibana, Rie Kido, Shoji Comput Math Methods Med Research Article We applied and optimized the sparse representation (SR) approaches in the computer-aided diagnosis (CAD) to classify normal tissues and five kinds of diffuse lung disease (DLD) patterns: consolidation, ground-glass opacity, honeycombing, emphysema, and nodule. By using the K-SVD which is based on the singular value decomposition (SVD) and orthogonal matching pursuit (OMP), it can achieve a satisfied recognition rate, but too much time was spent in the experiment. To reduce the runtime of the method, the K-Means algorithm was substituted for the K-SVD, and the OMP was simplified by searching the desired atoms at one time (OMP(1)). We proposed three SR based methods for evaluation: SR1 (K-SVD+OMP), SR2 (K-Means+OMP), and SR3 (K-Means+OMP(1)). 1161 volumes of interest (VOIs) were used to optimize the parameters and train each method, and 1049 VOIs were adopted to evaluate the performances of the methods. The SR based methods were powerful to recognize the DLD patterns (SR1: 96.1%, SR2: 95.6%, SR3: 96.4%) and significantly better than the baseline methods. Furthermore, when the K-Means and OMP(1) were applied, the runtime of the SR based methods can be reduced by 98.2% and 55.2%, respectively. Therefore, we thought that the method using the K-Means and OMP(1) (SR3) was efficient for the CAD of the DLDs. Hindawi Publishing Corporation 2015 2015-03-03 /pmc/articles/PMC4363677/ /pubmed/25821509 http://dx.doi.org/10.1155/2015/567932 Text en Copyright © 2015 Wei Zhao et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhao, Wei
Xu, Rui
Hirano, Yasushi
Tachibana, Rie
Kido, Shoji
A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases
title A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases
title_full A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases
title_fullStr A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases
title_full_unstemmed A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases
title_short A Sparse Representation Based Method to Classify Pulmonary Patterns of Diffuse Lung Diseases
title_sort sparse representation based method to classify pulmonary patterns of diffuse lung diseases
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4363677/
https://www.ncbi.nlm.nih.gov/pubmed/25821509
http://dx.doi.org/10.1155/2015/567932
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