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Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes
AIM: To assess the usefulness of a DNA-based method for identifying mushroom species for application in forensic laboratory practice. METHODS: Two hundred twenty-one samples of clinical forensic material (dried mushrooms, food remains, stomach contents, feces, etc) were analyzed. ITS2 region of nucl...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Croatian Medical Schools
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4364345/ https://www.ncbi.nlm.nih.gov/pubmed/25727040 http://dx.doi.org/10.3325/cmj.2015.56.32 |
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author | Kowalczyk, Marek Sekuła, Andrzej Mleczko, Piotr Olszowy, Zofia Kujawa, Anna Zubek, Szymon Kupiec, Tomasz |
author_facet | Kowalczyk, Marek Sekuła, Andrzej Mleczko, Piotr Olszowy, Zofia Kujawa, Anna Zubek, Szymon Kupiec, Tomasz |
author_sort | Kowalczyk, Marek |
collection | PubMed |
description | AIM: To assess the usefulness of a DNA-based method for identifying mushroom species for application in forensic laboratory practice. METHODS: Two hundred twenty-one samples of clinical forensic material (dried mushrooms, food remains, stomach contents, feces, etc) were analyzed. ITS2 region of nuclear ribosomal DNA (nrDNA) was sequenced and the sequences were compared with reference sequences collected from the National Center for Biotechnology Information gene bank (GenBank). Sporological identification of mushrooms was also performed for 57 samples of clinical material. RESULTS: Of 221 samples, positive sequencing results were obtained for 152 (69%). The highest percentage of positive results was obtained for samples of dried mushrooms (96%) and food remains (91%). Comparison with GenBank sequences enabled identification of all samples at least at the genus level. Most samples (90%) were identified at the level of species or a group of closely related species. Sporological and molecular identification were consistent at the level of species or genus for 30% of analyzed samples. CONCLUSION: Molecular analysis identified a larger number of species than sporological method. It proved to be suitable for analysis of evidential material (dried hallucinogenic mushrooms) in forensic genetic laboratories as well as to complement classical methods in the analysis of clinical material. |
format | Online Article Text |
id | pubmed-4364345 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Croatian Medical Schools |
record_format | MEDLINE/PubMed |
spelling | pubmed-43643452015-03-24 Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes Kowalczyk, Marek Sekuła, Andrzej Mleczko, Piotr Olszowy, Zofia Kujawa, Anna Zubek, Szymon Kupiec, Tomasz Croat Med J Forensic Science AIM: To assess the usefulness of a DNA-based method for identifying mushroom species for application in forensic laboratory practice. METHODS: Two hundred twenty-one samples of clinical forensic material (dried mushrooms, food remains, stomach contents, feces, etc) were analyzed. ITS2 region of nuclear ribosomal DNA (nrDNA) was sequenced and the sequences were compared with reference sequences collected from the National Center for Biotechnology Information gene bank (GenBank). Sporological identification of mushrooms was also performed for 57 samples of clinical material. RESULTS: Of 221 samples, positive sequencing results were obtained for 152 (69%). The highest percentage of positive results was obtained for samples of dried mushrooms (96%) and food remains (91%). Comparison with GenBank sequences enabled identification of all samples at least at the genus level. Most samples (90%) were identified at the level of species or a group of closely related species. Sporological and molecular identification were consistent at the level of species or genus for 30% of analyzed samples. CONCLUSION: Molecular analysis identified a larger number of species than sporological method. It proved to be suitable for analysis of evidential material (dried hallucinogenic mushrooms) in forensic genetic laboratories as well as to complement classical methods in the analysis of clinical material. Croatian Medical Schools 2015-02 /pmc/articles/PMC4364345/ /pubmed/25727040 http://dx.doi.org/10.3325/cmj.2015.56.32 Text en Copyright © 2015 by the Croatian Medical Journal. All rights reserved. http://creativecommons.org/licenses/by/2.5/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Forensic Science Kowalczyk, Marek Sekuła, Andrzej Mleczko, Piotr Olszowy, Zofia Kujawa, Anna Zubek, Szymon Kupiec, Tomasz Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes |
title | Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes |
title_full | Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes |
title_fullStr | Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes |
title_full_unstemmed | Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes |
title_short | Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes |
title_sort | practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes |
topic | Forensic Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4364345/ https://www.ncbi.nlm.nih.gov/pubmed/25727040 http://dx.doi.org/10.3325/cmj.2015.56.32 |
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