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Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors

Insect Odorant Receptors (ORs) comprise an enormous protein family that translates environmental chemical signals into neuronal electrical activity. These heptahelical receptors are proposed to function as ligand-gated ion channels and/or to act metabotropically as G protein-coupled receptors (GPCRs...

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Autores principales: Hopf, Thomas A., Morinaga, Satoshi, Ihara, Sayoko, Touhara, Kazushige, Marks, Debora S., Benton, Richard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4364406/
https://www.ncbi.nlm.nih.gov/pubmed/25584517
http://dx.doi.org/10.1038/ncomms7077
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author Hopf, Thomas A.
Morinaga, Satoshi
Ihara, Sayoko
Touhara, Kazushige
Marks, Debora S.
Benton, Richard
author_facet Hopf, Thomas A.
Morinaga, Satoshi
Ihara, Sayoko
Touhara, Kazushige
Marks, Debora S.
Benton, Richard
author_sort Hopf, Thomas A.
collection PubMed
description Insect Odorant Receptors (ORs) comprise an enormous protein family that translates environmental chemical signals into neuronal electrical activity. These heptahelical receptors are proposed to function as ligand-gated ion channels and/or to act metabotropically as G protein-coupled receptors (GPCRs). Resolving their signalling mechanism has been hampered by the lack of tertiary structural information and primary sequence similarity to other proteins. We use amino acid evolutionary covariation across these ORs to define restraints on structural proximity of residue pairs, which permit de novo generation of three-dimensional models. The validity of our analysis is supported by the location of functionally important residues in highly constrained regions of the protein. Importantly, insect OR models exhibit a distinct transmembrane domain packing arrangement to that of canonical GPCRs, establishing the structural unrelatedness of these receptor families. The evolutionary couplings and models predict odour binding and ion conduction domains, and provide a template for rationale structure-activity dissection.
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spelling pubmed-43644062015-07-13 Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors Hopf, Thomas A. Morinaga, Satoshi Ihara, Sayoko Touhara, Kazushige Marks, Debora S. Benton, Richard Nat Commun Article Insect Odorant Receptors (ORs) comprise an enormous protein family that translates environmental chemical signals into neuronal electrical activity. These heptahelical receptors are proposed to function as ligand-gated ion channels and/or to act metabotropically as G protein-coupled receptors (GPCRs). Resolving their signalling mechanism has been hampered by the lack of tertiary structural information and primary sequence similarity to other proteins. We use amino acid evolutionary covariation across these ORs to define restraints on structural proximity of residue pairs, which permit de novo generation of three-dimensional models. The validity of our analysis is supported by the location of functionally important residues in highly constrained regions of the protein. Importantly, insect OR models exhibit a distinct transmembrane domain packing arrangement to that of canonical GPCRs, establishing the structural unrelatedness of these receptor families. The evolutionary couplings and models predict odour binding and ion conduction domains, and provide a template for rationale structure-activity dissection. 2015-01-13 /pmc/articles/PMC4364406/ /pubmed/25584517 http://dx.doi.org/10.1038/ncomms7077 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Hopf, Thomas A.
Morinaga, Satoshi
Ihara, Sayoko
Touhara, Kazushige
Marks, Debora S.
Benton, Richard
Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
title Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
title_full Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
title_fullStr Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
title_full_unstemmed Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
title_short Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
title_sort amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4364406/
https://www.ncbi.nlm.nih.gov/pubmed/25584517
http://dx.doi.org/10.1038/ncomms7077
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