Cargando…

A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea

High experimental validation/genotyping success rate (94–96%) and intra-specific polymorphic potential (82–96%) of 1536 SNP and 472 SSR markers showing in silico polymorphism between desi ICC 4958 and kabuli ICC 12968 chickpea was obtained in a 190 mapping population (ICC 4958 × ICC 12968) and 92 di...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bajaj, Deepak, Upadhyaya, Hari D., Khan, Yusuf, Das, Shouvik, Badoni, Saurabh, Shree, Tanima, Kumar, Vinod, Tripathi, Shailesh, Gowda, C. L. L., Singh, Sube, Sharma, Shivali, Tyagi, Akhilesh K., Chattopdhyay, Debasis, Parida, Swarup K.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2015
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4365403/ https://www.ncbi.nlm.nih.gov/pubmed/25786576 http://dx.doi.org/10.1038/srep09264

Ejemplares similares

Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea
por: Das, Shouvik, et al.
Publicado: (2015)

A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea
por: Bajaj, Deepak, et al.
Publicado: (2015)

A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea
por: Kujur, Alice, et al.
Publicado: (2015)

Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in chickpea
por: Kujur, Alice, et al.
Publicado: (2015)

Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea
por: Kujur, Alice, et al.
Publicado: (2015)

Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea
por: Bajaj, Deepak, et al.
Publicado: (2015)

Genetic dissection of seed-iron and zinc concentrations in chickpea
por: Upadhyaya, Hari D., et al.
Publicado: (2016)

Genome-wide insertion–deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea
por: Das, Shouvik, et al.
Publicado: (2015)

Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea
por: Upadhyaya, Hari D., et al.
Publicado: (2016)

Genome-wide high-throughput SNP discovery and genotyping for understanding natural (functional) allelic diversity and domestication patterns in wild chickpea
por: Bajaj, Deepak, et al.
Publicado: (2015)

Natural Allelic Diversity, Genetic Structure and Linkage Disequilibrium Pattern in Wild Chickpea
por: Saxena, Maneesha S., et al.
Publicado: (2014)

Functionally Relevant Microsatellite Markers From Chickpea Transcription Factor Genes for Efficient Genotyping Applications and Trait Association Mapping
por: Kujur, Alice, et al.
Publicado: (2013)

Identification of candidate genes and natural allelic variants for QTLs governing plant height in chickpea
por: Kujur, Alice, et al.
Publicado: (2016)

mQTL-seq delineates functionally relevant candidate gene harbouring a major QTL regulating pod number in chickpea
por: Das, Shouvik, et al.
Publicado: (2016)

A Multiple QTL-Seq Strategy Delineates Potential Genomic Loci Governing Flowering Time in Chickpea
por: Srivastava, Rishi, et al.
Publicado: (2017)

EcoTILLING-Based Association Mapping Efficiently Delineates Functionally Relevant Natural Allelic Variants of Candidate Genes Governing Agronomic Traits in Chickpea
por: Bajaj, Deepak, et al.
Publicado: (2016)

An Integrated Genomic Approach for Rapid Delineation of Candidate Genes Regulating Agro-Morphological Traits in Chickpea
por: Saxena, Maneesha S., et al.
Publicado: (2014)

An Efficient Strategy Combining SSR Markers- and Advanced QTL-seq-driven QTL Mapping Unravels Candidate Genes Regulating Grain Weight in Rice
por: Daware, Anurag, et al.
Publicado: (2016)

A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea
por: Thakro, Virevol, et al.
Publicado: (2022)

Genome-wide generation and genotyping of informative SNPs to scan molecular signatures for seed yield in chickpea
por: Basu, Udita, et al.
Publicado: (2018)

Comparative Analysis of Kabuli Chickpea Transcriptome with Desi and Wild Chickpea Provides a Rich Resource for Development of Functional Markers
por: Agarwal, Gaurav, et al.
Publicado: (2012)

An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.)
por: Parween, Sabiha, et al.
Publicado: (2015)

A repeat length variation in myo-inositol monophosphatase gene contributes to seed size trait in chickpea
por: Dwivedi, Vikas, et al.
Publicado: (2017)

bHLH142 regulates various metabolic pathway-related genes to affect pollen development and anther dehiscence in rice
por: Ranjan, Rajeev, et al.
Publicado: (2017)

Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.)
por: Upadhyaya, Hari D, et al.
Publicado: (2008)

Nitric oxide accelerates germination via the regulation of respiration in chickpea
por: Pandey, Sonika, et al.
Publicado: (2019)

Development of genome-wide informative simple sequence repeat markers for large-scale genotyping applications in chickpea and development of web resource
por: Parida, Swarup K., et al.
Publicado: (2015)

Transcriptome landscape of perennial wild Cicer microphyllum uncovers functionally relevant molecular tags regulating agronomic traits in chickpea
por: Srivastava, Rishi, et al.
Publicado: (2016)

Genome-wide generation and use of informative intron-spanning and intron-length polymorphism markers for high-throughput genetic analysis in rice
por: Badoni, Saurabh, et al.
Publicado: (2016)

A High-Resolution InDel (Insertion–Deletion) Markers-Anchored Consensus Genetic Map Identifies Major QTLs Governing Pod Number and Seed Yield in Chickpea
por: Srivastava, Rishi, et al.
Publicado: (2016)

Emerging Molecular Strategies for Improving Rice Drought Tolerance
por: Giri, Jitender, et al.
Publicado: (2021)

Characterization of ‘QTL-hotspot’ introgression lines reveals physiological mechanisms and candidate genes associated with drought adaptation in chickpea
por: Barmukh, Rutwik, et al.
Publicado: (2022)

High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea
por: Gaur, Rashmi, et al.
Publicado: (2015)

Development and Integration of Genome-Wide Polymorphic Microsatellite Markers onto a Reference Linkage Map for Constructing a High-Density Genetic Map of Chickpea
por: Khajuria, Yash Paul, et al.
Publicado: (2015)

The chickpea genomic web resource: visualization and analysis of the desi-type Cicer arietinum nuclear genome for comparative exploration of legumes
por: Misra, Gopal, et al.
Publicado: (2014)

Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement
por: Gupta, Sonal, et al.
Publicado: (2017)

High-Throughput SNP Discovery and Genotyping for Constructing a Saturated Linkage Map of Chickpea (Cicer arietinum L.)
por: Gaur, Rashmi, et al.
Publicado: (2012)

JAZ Repressors: Potential Involvement in Nutrients Deficiency Response in Rice and Chickpea
por: Singh, Ajit P., et al.
Publicado: (2015)

Phenotyping Chickpeas and Pigeonpeas for Adaptation to Drought
por: Upadhyaya, H. D., et al.
Publicado: (2012)

Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.)
por: Ramamoorthy, Purushothaman, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_ngajp1duv2v2m5fc5g5blpl28b