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Abiotic ligation of DNA oligomers templated by their liquid crystal ordering
It has been observed that concentrated solutions of short DNA oligomers develop liquid crystal ordering as the result of a hierarchically structured supramolecular self-assembly. In mixtures of oligomers with various degree of complementarity, liquid crystal microdomains are formed via the selective...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Pub. Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4366493/ https://www.ncbi.nlm.nih.gov/pubmed/25752840 http://dx.doi.org/10.1038/ncomms7424 |
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author | Fraccia, Tommaso P. Smith, Gregory P. Zanchetta, Giuliano Paraboschi, Elvezia Yi, Yougwooo Walba, David M. Dieci, Giorgio Clark, Noel A. Bellini, Tommaso |
author_facet | Fraccia, Tommaso P. Smith, Gregory P. Zanchetta, Giuliano Paraboschi, Elvezia Yi, Yougwooo Walba, David M. Dieci, Giorgio Clark, Noel A. Bellini, Tommaso |
author_sort | Fraccia, Tommaso P. |
collection | PubMed |
description | It has been observed that concentrated solutions of short DNA oligomers develop liquid crystal ordering as the result of a hierarchically structured supramolecular self-assembly. In mixtures of oligomers with various degree of complementarity, liquid crystal microdomains are formed via the selective aggregation of those oligomers that have a sufficient degree of duplexing and propensity for physical polymerization. Here we show that such domains act as fluid and permeable microreactors in which the order-stabilized molecular contacts between duplex terminals serve as physical templates for their chemical ligation. In the presence of abiotic condensing agents, liquid crystal ordering markedly enhances ligation efficacy, thereby enhancing its own phase stability. The coupling between order-templated ligation and selectivity provided by supramolecular ordering enables an autocatalytic cycle favouring the growth of DNA chains, up to biologically relevant lengths, from few-base long oligomers. This finding suggests a novel scenario for the abiotic origin of nucleic acids. |
format | Online Article Text |
id | pubmed-4366493 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Pub. Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-43664932015-04-02 Abiotic ligation of DNA oligomers templated by their liquid crystal ordering Fraccia, Tommaso P. Smith, Gregory P. Zanchetta, Giuliano Paraboschi, Elvezia Yi, Yougwooo Walba, David M. Dieci, Giorgio Clark, Noel A. Bellini, Tommaso Nat Commun Article It has been observed that concentrated solutions of short DNA oligomers develop liquid crystal ordering as the result of a hierarchically structured supramolecular self-assembly. In mixtures of oligomers with various degree of complementarity, liquid crystal microdomains are formed via the selective aggregation of those oligomers that have a sufficient degree of duplexing and propensity for physical polymerization. Here we show that such domains act as fluid and permeable microreactors in which the order-stabilized molecular contacts between duplex terminals serve as physical templates for their chemical ligation. In the presence of abiotic condensing agents, liquid crystal ordering markedly enhances ligation efficacy, thereby enhancing its own phase stability. The coupling between order-templated ligation and selectivity provided by supramolecular ordering enables an autocatalytic cycle favouring the growth of DNA chains, up to biologically relevant lengths, from few-base long oligomers. This finding suggests a novel scenario for the abiotic origin of nucleic acids. Nature Pub. Group 2015-03-10 /pmc/articles/PMC4366493/ /pubmed/25752840 http://dx.doi.org/10.1038/ncomms7424 Text en Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/ |
spellingShingle | Article Fraccia, Tommaso P. Smith, Gregory P. Zanchetta, Giuliano Paraboschi, Elvezia Yi, Yougwooo Walba, David M. Dieci, Giorgio Clark, Noel A. Bellini, Tommaso Abiotic ligation of DNA oligomers templated by their liquid crystal ordering |
title | Abiotic ligation of DNA oligomers templated by their liquid crystal ordering |
title_full | Abiotic ligation of DNA oligomers templated by their liquid crystal ordering |
title_fullStr | Abiotic ligation of DNA oligomers templated by their liquid crystal ordering |
title_full_unstemmed | Abiotic ligation of DNA oligomers templated by their liquid crystal ordering |
title_short | Abiotic ligation of DNA oligomers templated by their liquid crystal ordering |
title_sort | abiotic ligation of dna oligomers templated by their liquid crystal ordering |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4366493/ https://www.ncbi.nlm.nih.gov/pubmed/25752840 http://dx.doi.org/10.1038/ncomms7424 |
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