Cargando…
Use of Multispectral Imaging in Varietal Identification of Tomato
Multispectral imaging is an emerging non-destructive technology. In this work its potential for varietal discrimination and identification of tomato cultivars of Nepal was investigated. Two sample sets were used for the study, one with two parents and their crosses and other with eleven cultivars to...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4367422/ https://www.ncbi.nlm.nih.gov/pubmed/25690549 http://dx.doi.org/10.3390/s150204496 |
_version_ | 1782362537309765632 |
---|---|
author | Shrestha, Santosh Deleuran, Lise Christina Olesen, Merete Halkjær Gislum, René |
author_facet | Shrestha, Santosh Deleuran, Lise Christina Olesen, Merete Halkjær Gislum, René |
author_sort | Shrestha, Santosh |
collection | PubMed |
description | Multispectral imaging is an emerging non-destructive technology. In this work its potential for varietal discrimination and identification of tomato cultivars of Nepal was investigated. Two sample sets were used for the study, one with two parents and their crosses and other with eleven cultivars to study parents and offspring relationship and varietal identification respectively. Normalized canonical discriminant analysis (nCDA) and principal component analysis (PCA) were used to analyze and compare the results for parents and offspring study. Both the results showed clear discrimination of parents and offspring. nCDA was also used for pairwise discrimination of the eleven cultivars, which correctly discriminated upto 100% and only few pairs below 85%. Partial least square discriminant analysis (PLS-DA) was further used to classify all the cultivars. The model displayed an overall classification accuracy of 82%, which was further improved to 96% and 86% with stepwise PLS-DA models on high (seven) and poor (four) sensitivity cultivars, respectively. The stepwise PLS-DA models had satisfactory classification errors for cross-validation and prediction 7% and 7%, respectively. The results obtained provide an opportunity of using multispectral imaging technology as a primary tool in a scientific community for identification/discrimination of plant varieties in regard to genetic purity and plant variety protection/registration. |
format | Online Article Text |
id | pubmed-4367422 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-43674222015-04-30 Use of Multispectral Imaging in Varietal Identification of Tomato Shrestha, Santosh Deleuran, Lise Christina Olesen, Merete Halkjær Gislum, René Sensors (Basel) Article Multispectral imaging is an emerging non-destructive technology. In this work its potential for varietal discrimination and identification of tomato cultivars of Nepal was investigated. Two sample sets were used for the study, one with two parents and their crosses and other with eleven cultivars to study parents and offspring relationship and varietal identification respectively. Normalized canonical discriminant analysis (nCDA) and principal component analysis (PCA) were used to analyze and compare the results for parents and offspring study. Both the results showed clear discrimination of parents and offspring. nCDA was also used for pairwise discrimination of the eleven cultivars, which correctly discriminated upto 100% and only few pairs below 85%. Partial least square discriminant analysis (PLS-DA) was further used to classify all the cultivars. The model displayed an overall classification accuracy of 82%, which was further improved to 96% and 86% with stepwise PLS-DA models on high (seven) and poor (four) sensitivity cultivars, respectively. The stepwise PLS-DA models had satisfactory classification errors for cross-validation and prediction 7% and 7%, respectively. The results obtained provide an opportunity of using multispectral imaging technology as a primary tool in a scientific community for identification/discrimination of plant varieties in regard to genetic purity and plant variety protection/registration. MDPI 2015-02-16 /pmc/articles/PMC4367422/ /pubmed/25690549 http://dx.doi.org/10.3390/s150204496 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Shrestha, Santosh Deleuran, Lise Christina Olesen, Merete Halkjær Gislum, René Use of Multispectral Imaging in Varietal Identification of Tomato |
title | Use of Multispectral Imaging in Varietal Identification of Tomato |
title_full | Use of Multispectral Imaging in Varietal Identification of Tomato |
title_fullStr | Use of Multispectral Imaging in Varietal Identification of Tomato |
title_full_unstemmed | Use of Multispectral Imaging in Varietal Identification of Tomato |
title_short | Use of Multispectral Imaging in Varietal Identification of Tomato |
title_sort | use of multispectral imaging in varietal identification of tomato |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4367422/ https://www.ncbi.nlm.nih.gov/pubmed/25690549 http://dx.doi.org/10.3390/s150204496 |
work_keys_str_mv | AT shresthasantosh useofmultispectralimaginginvarietalidentificationoftomato AT deleuranlisechristina useofmultispectralimaginginvarietalidentificationoftomato AT olesenmeretehalkjær useofmultispectralimaginginvarietalidentificationoftomato AT gislumrene useofmultispectralimaginginvarietalidentificationoftomato |