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Predicting Abraham model solvent coefficients
BACKGROUND: The Abraham general solvation model can be used in a broad set of scenarios involving partitioning and solubility, yet is limited to a set of solvents with measured Abraham coefficients. Here we extend the range of applicability of Abraham’s model by creating open models that can be used...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4369285/ https://www.ncbi.nlm.nih.gov/pubmed/25798192 http://dx.doi.org/10.1186/s13065-015-0085-4 |
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author | Bradley, Jean-Claude Abraham, Michael H Acree, William E Lang, Andrew SID |
author_facet | Bradley, Jean-Claude Abraham, Michael H Acree, William E Lang, Andrew SID |
author_sort | Bradley, Jean-Claude |
collection | PubMed |
description | BACKGROUND: The Abraham general solvation model can be used in a broad set of scenarios involving partitioning and solubility, yet is limited to a set of solvents with measured Abraham coefficients. Here we extend the range of applicability of Abraham’s model by creating open models that can be used to predict the solvent coefficients for all organic solvents. RESULTS: We created open random forest models for the solvent coefficients e, s, a, b, and v that had out-of-bag R(2) values of 0.31, 0.77, 0.92, 0.47, and 0.63 respectively. The models were used to suggest sustainable solvent replacements for commonly used solvents. For example, our models predict that propylene glycol may be used as a general sustainable solvent replacement for methanol. CONCLUSION: The solvent coefficient models extend the range of applicability of the Abraham general solvation equations to all organic solvents. The models were developed under Open Notebook Science conditions which makes them open, reproducible, and as useful as possible. [Figure: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13065-015-0085-4) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4369285 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-43692852015-03-23 Predicting Abraham model solvent coefficients Bradley, Jean-Claude Abraham, Michael H Acree, William E Lang, Andrew SID Chem Cent J Research Article BACKGROUND: The Abraham general solvation model can be used in a broad set of scenarios involving partitioning and solubility, yet is limited to a set of solvents with measured Abraham coefficients. Here we extend the range of applicability of Abraham’s model by creating open models that can be used to predict the solvent coefficients for all organic solvents. RESULTS: We created open random forest models for the solvent coefficients e, s, a, b, and v that had out-of-bag R(2) values of 0.31, 0.77, 0.92, 0.47, and 0.63 respectively. The models were used to suggest sustainable solvent replacements for commonly used solvents. For example, our models predict that propylene glycol may be used as a general sustainable solvent replacement for methanol. CONCLUSION: The solvent coefficient models extend the range of applicability of the Abraham general solvation equations to all organic solvents. The models were developed under Open Notebook Science conditions which makes them open, reproducible, and as useful as possible. [Figure: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13065-015-0085-4) contains supplementary material, which is available to authorized users. Springer International Publishing 2015-03-22 /pmc/articles/PMC4369285/ /pubmed/25798192 http://dx.doi.org/10.1186/s13065-015-0085-4 Text en © Bradley et al.; licensee Springer. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Bradley, Jean-Claude Abraham, Michael H Acree, William E Lang, Andrew SID Predicting Abraham model solvent coefficients |
title | Predicting Abraham model solvent coefficients |
title_full | Predicting Abraham model solvent coefficients |
title_fullStr | Predicting Abraham model solvent coefficients |
title_full_unstemmed | Predicting Abraham model solvent coefficients |
title_short | Predicting Abraham model solvent coefficients |
title_sort | predicting abraham model solvent coefficients |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4369285/ https://www.ncbi.nlm.nih.gov/pubmed/25798192 http://dx.doi.org/10.1186/s13065-015-0085-4 |
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