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From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses
Studies in molecular ecology depend on field-collected samples for genetic information, and the tissue sampled and preservation conditions strongly affect the quality of the DNA obtained. DNA yields from different tissue types have seldom been compared, and the relative performance of storage media...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4370412/ https://www.ncbi.nlm.nih.gov/pubmed/25798819 http://dx.doi.org/10.1371/journal.pone.0118994 |
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author | Corthals, Angelique Martin, Alynn Warsi, Omar M. Woller-Skar, Megan Lancaster, Winston Russell, Amy Dávalos, Liliana M. |
author_facet | Corthals, Angelique Martin, Alynn Warsi, Omar M. Woller-Skar, Megan Lancaster, Winston Russell, Amy Dávalos, Liliana M. |
author_sort | Corthals, Angelique |
collection | PubMed |
description | Studies in molecular ecology depend on field-collected samples for genetic information, and the tissue sampled and preservation conditions strongly affect the quality of the DNA obtained. DNA yields from different tissue types have seldom been compared, and the relative performance of storage media has never been directly tested, even though these media may influence DNA degradation under field conditions. We analyzed DNA yield from buccal swabs and wing punches harvested from live bats using nucleic acid quantification as well as quantitative PCR for a single-copy nuclear locus. We also compared DNA yields from wing tissue preserved in three media: ethanol, NaCl-saturated dimethyl sulfoxide (DMSO), and silica desiccant. Wing punches yielded more total DNA than did buccal swabs, and wing tissues preserved in silica beads yielded significantly more total and nuclear DNA than those preserved in DMSO or ethanol. These results show that tissue type and preservation media strongly influence the quantity of DNA obtained from non-lethal genetic samples, and based on these effects we provide recommendations for field collection of tissues for genetic analyses. |
format | Online Article Text |
id | pubmed-4370412 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43704122015-04-04 From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses Corthals, Angelique Martin, Alynn Warsi, Omar M. Woller-Skar, Megan Lancaster, Winston Russell, Amy Dávalos, Liliana M. PLoS One Research Article Studies in molecular ecology depend on field-collected samples for genetic information, and the tissue sampled and preservation conditions strongly affect the quality of the DNA obtained. DNA yields from different tissue types have seldom been compared, and the relative performance of storage media has never been directly tested, even though these media may influence DNA degradation under field conditions. We analyzed DNA yield from buccal swabs and wing punches harvested from live bats using nucleic acid quantification as well as quantitative PCR for a single-copy nuclear locus. We also compared DNA yields from wing tissue preserved in three media: ethanol, NaCl-saturated dimethyl sulfoxide (DMSO), and silica desiccant. Wing punches yielded more total DNA than did buccal swabs, and wing tissues preserved in silica beads yielded significantly more total and nuclear DNA than those preserved in DMSO or ethanol. These results show that tissue type and preservation media strongly influence the quantity of DNA obtained from non-lethal genetic samples, and based on these effects we provide recommendations for field collection of tissues for genetic analyses. Public Library of Science 2015-03-23 /pmc/articles/PMC4370412/ /pubmed/25798819 http://dx.doi.org/10.1371/journal.pone.0118994 Text en © 2015 Corthals et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Corthals, Angelique Martin, Alynn Warsi, Omar M. Woller-Skar, Megan Lancaster, Winston Russell, Amy Dávalos, Liliana M. From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses |
title | From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses |
title_full | From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses |
title_fullStr | From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses |
title_full_unstemmed | From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses |
title_short | From the Field to the Lab: Best Practices for Field Preservation of Bat Specimens for Molecular Analyses |
title_sort | from the field to the lab: best practices for field preservation of bat specimens for molecular analyses |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4370412/ https://www.ncbi.nlm.nih.gov/pubmed/25798819 http://dx.doi.org/10.1371/journal.pone.0118994 |
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