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Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer

Genome-wide association studies (GWASs) have already identified at least 22 common susceptibility loci associated with an increased risk of colorectal cancer (CRC). This study examined the relationship between these single nucleotide polymorphisms (SNPs) and the clinical outcomes of patients with co...

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Autores principales: Kang, Byung Woog, Jeon, Hyo-Sung, Chae, Yee Soo, Lee, Soo Jung, Park, Jae Yong, Choi, Jin Eun, Park, Jun Seok, Choi, Gyu Seog, Kim, Jong Gwang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4370892/
https://www.ncbi.nlm.nih.gov/pubmed/25799222
http://dx.doi.org/10.1371/journal.pone.0119649
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author Kang, Byung Woog
Jeon, Hyo-Sung
Chae, Yee Soo
Lee, Soo Jung
Park, Jae Yong
Choi, Jin Eun
Park, Jun Seok
Choi, Gyu Seog
Kim, Jong Gwang
author_facet Kang, Byung Woog
Jeon, Hyo-Sung
Chae, Yee Soo
Lee, Soo Jung
Park, Jae Yong
Choi, Jin Eun
Park, Jun Seok
Choi, Gyu Seog
Kim, Jong Gwang
author_sort Kang, Byung Woog
collection PubMed
description Genome-wide association studies (GWASs) have already identified at least 22 common susceptibility loci associated with an increased risk of colorectal cancer (CRC). This study examined the relationship between these single nucleotide polymorphisms (SNPs) and the clinical outcomes of patients with colorectal cancer. Seven hundred seventy-six patients with surgically resected colorectal adenocarcinoma were enrolled in the present study. Twenty-two of the GWAS-identified SNPs were genotyped using a Sequenom MassARRAY. Among the 22 SNPs, two (rs1321311G>T in CDKN1A and rs10411210C>T in RHPN2) were significantly associated with the survival outcomes of CRC in a multivariate survival analysis. In a recessive model, the rs1321311 TT genotype (vs. GG + GT) and rs10411210 TT genotype (vs. CC + CT) were associated with a worse prognosis for disease-free survival (adjusted HR = 1.90; 95% confidence interval = 1.00-3.60; P = 0.050, adjusted HR = 1.94; 95% confidence interval = 1.05-3.57; P = 0.034, respectively) and overall survival (adjusted HR = 2.05; 95% confidence interval = 1.00-4.20; P = 0.049, adjusted HR = 2.06; 95% confidence interval = 1.05-4.05; P = 0.036, respectively). None of the other SNPs was significantly associated with any clinicopathologic features or survival. The present results suggest that the genetic variants of the CDKN1A (rs1321311) and RHPN2 (rs10411210) genes can be used as prognostic biomarkers for patients with surgically resected colorectal cancer.
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spelling pubmed-43708922015-04-04 Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer Kang, Byung Woog Jeon, Hyo-Sung Chae, Yee Soo Lee, Soo Jung Park, Jae Yong Choi, Jin Eun Park, Jun Seok Choi, Gyu Seog Kim, Jong Gwang PLoS One Research Article Genome-wide association studies (GWASs) have already identified at least 22 common susceptibility loci associated with an increased risk of colorectal cancer (CRC). This study examined the relationship between these single nucleotide polymorphisms (SNPs) and the clinical outcomes of patients with colorectal cancer. Seven hundred seventy-six patients with surgically resected colorectal adenocarcinoma were enrolled in the present study. Twenty-two of the GWAS-identified SNPs were genotyped using a Sequenom MassARRAY. Among the 22 SNPs, two (rs1321311G>T in CDKN1A and rs10411210C>T in RHPN2) were significantly associated with the survival outcomes of CRC in a multivariate survival analysis. In a recessive model, the rs1321311 TT genotype (vs. GG + GT) and rs10411210 TT genotype (vs. CC + CT) were associated with a worse prognosis for disease-free survival (adjusted HR = 1.90; 95% confidence interval = 1.00-3.60; P = 0.050, adjusted HR = 1.94; 95% confidence interval = 1.05-3.57; P = 0.034, respectively) and overall survival (adjusted HR = 2.05; 95% confidence interval = 1.00-4.20; P = 0.049, adjusted HR = 2.06; 95% confidence interval = 1.05-4.05; P = 0.036, respectively). None of the other SNPs was significantly associated with any clinicopathologic features or survival. The present results suggest that the genetic variants of the CDKN1A (rs1321311) and RHPN2 (rs10411210) genes can be used as prognostic biomarkers for patients with surgically resected colorectal cancer. Public Library of Science 2015-03-23 /pmc/articles/PMC4370892/ /pubmed/25799222 http://dx.doi.org/10.1371/journal.pone.0119649 Text en © 2015 Kang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Kang, Byung Woog
Jeon, Hyo-Sung
Chae, Yee Soo
Lee, Soo Jung
Park, Jae Yong
Choi, Jin Eun
Park, Jun Seok
Choi, Gyu Seog
Kim, Jong Gwang
Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer
title Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer
title_full Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer
title_fullStr Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer
title_full_unstemmed Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer
title_short Association between GWAS-Identified Genetic Variations and Disease Prognosis for Patients with Colorectal Cancer
title_sort association between gwas-identified genetic variations and disease prognosis for patients with colorectal cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4370892/
https://www.ncbi.nlm.nih.gov/pubmed/25799222
http://dx.doi.org/10.1371/journal.pone.0119649
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